Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe04g00073 | ATGACGAAGAGGAAGAAGACAGGAACAGTGCCGGTTTATCTGAATGTTTATGATCTTACGCCGATCAATGGCTACGCCTACTGGCTCGGCCTTGGGGTTTATCATTCCGGTGTTCAAGTTCATGGCGTTGAATATGCCTACGGAGCACATGAACGTTCTTCTGGGGGGATATTCGAAGTCGAACCAAAACATTGTCCTGGCTTCACCTTCAGAAAATCTATAACTATTGGAAAAACTAATCTTGGTCCCAAAGAGGTCCGTTCTTTGATGGAGAAACTAGCTGAACGTTATACAGGAAATACTTACCATCTCATAACAAAAAATTGCAACCATTTTTGCAATGATGTGTGTCTCAGATTGGCGGGAAAATCTATCCCGAGCTGGGTCAACAGGCTAGCTCGACTTGGTTTTCTTTGCAACTGCGTTCTACCAGCGAGTATAAATAAGACAAATGTTCAGCAAGGAAGATTACAGAGGGCTTTGCAGGGGGAAATGGAGAATTTTCCTGGCGACCCGACCAGGTTTGAGTCATCTACTCTTCCTCTTCCCCGTAGATTGCCATCTTCTTCTCGTTCTGATACACATAGTAGTAGGCATAAGCATTGTAAGACACCGTCCTCCTCAATGCAGACTCCCTCAAACTCGTTCACTTTAAGACTGTGA | 663 | 44.49 | MTKRKKTGTVPVYLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYAYGAHERSSGGIFEVEPKHCPGFTFRKSITIGKTNLGPKEVRSLMEKLAERYTGNTYHLITKNCNHFCNDVCLRLAGKSIPSWVNRLARLGFLCNCVLPASINKTNVQQGRLQRALQGEMENFPGDPTRFESSTLPLPRRLPSSSRSDTHSSRHKHCKTPSSSMQTPSNSFTLRL | 220 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 570783 | 572266 | - | Bpe014796.2 | Bpe04g00073 | 101882 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe04g00073 | 220 | PANTHER | OS02G0788133 PROTEIN | 3 | 200 | - | - | |
| Bpe04g00073 | 220 | PANTHER | DESUMOYLATING ISOPEPTIDASE | 3 | 200 | IPR008580 | GO:0008233 | |
| Bpe04g00073 | 220 | ProSiteProfiles | PPPDE domain profile. | 10 | 151 | IPR008580 | GO:0008233 | |
| Bpe04g00073 | 220 | MobiDBLite | consensus disorder prediction | 203 | 220 | - | - | |
| Bpe04g00073 | 220 | MobiDBLite | consensus disorder prediction | 165 | 220 | - | - | |
| Bpe04g00073 | 220 | Gene3D | PPPDE domains | 5 | 167 | IPR042266 | - | |
| Bpe04g00073 | 220 | SMART | DUF862_2a | 10 | 148 | IPR008580 | GO:0008233 | |
| Bpe04g00073 | 220 | Pfam | PPPDE putative peptidase domain | 11 | 144 | IPR008580 | GO:0008233 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bpe02g00166 | Bpe04g00073 | CCT | |
| Bpe02g00166 | Bpe04g00073 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe03g00569 | Bpe-Chr3:25972972 | Bpe04g00073 | Bpe-Chr4:570783 | 2.54E-66 | dispersed | |
| Bpe04g00073 | Bpe-Chr4:570783 | Bpe09g00439 | Bpe-Chr9:11270002 | 5.98E-77 | dispersed | |
| Bpe06g00383 | Bpe-Chr6:15306076 | Bpe04g00073 | Bpe-Chr4:570783 | 5.68E-15 | transposed | |
| Bpe10g00332 | Bpe-Chr10:10890896 | Bpe04g00073 | Bpe-Chr4:570783 | 1.98E-15 | transposed | |
| Bpe02g01258 | Bpe-Chr2:16051037 | Bpe04g00073 | Bpe-Chr4:570783 | 1.29E-94 | wgd | |
| Bpe02g00546 | Bpe-Chr2:3540725 | Bpe04g00073 | Bpe-Chr4:570783 | 6.94E-116 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe04g00073 | K22763 | - | vvi:100268022 | 303.908 |