Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00250 TGGTTTGCTTTTCTAACTTATAGATATGAACTTGCAGGAGTGTTGTCTACCACATTCACGATAGCAAACAAATGTGACTACACAGTTTGGCCTGGCATTTTATCCAACGCTGGAGTCGCACCGCTTTCCACCACCGGCTTCGTACTACAGACCGGCGAATCTAAAATTATTACCGCACCGACTTCGTGGGGTGGTCGCTTCTGGGGAAGAACTCACTGCTCCGAAGACGACTCTGGAAAGTTCTCGTGCGTAACAGGTGATTGTGGCTCTAATAAGCTTGAATGTGCCGGAAATGGTGCCGCACCGCCGGCCACTCTCGCCGAGTTCACTTTAGATGGCTCCGGAGGACTTGATTTCTTCGATGTTAGCTTAGTCGACGGGTACAACCTCCCTATGATGGTGGTTCCGCAGGGAGGCACTGGTGAGAAGTGCACGAGCACCGGGTGCGTGGTGGATCTGAACAGCGCGTGTCCGTCGGAGCTGAAGGTGACGAGCGTGGACGGGAGCGAAAGCGTGGCATGTAAGAGCGCTTGCGAAGCATTTGGGAAGCCGGAATATTGTTGCAACGGCGCGTACAGCACACCTGACACATGCCAGCCGTCTTCTTACTCTCAAATGTTCAAAACCGCATGCCCACGCGCATACAGCTACGCCTACGACGATACGGCGAGTACCTTCACATGTGCATCTGCTGATTATATTATCACTTTCTGCCCATCTCCGACCACCAGTCAAAAGTCATCGCAGGGCCCTGCGACCAATGGCACGATGGTATACGAAGGTGCAGAGTCAGACCAGAGTGGCGCATCGCCATTGTCCGCGGTGGGCATTTTTTCTGGCGCCAATTCTTTAGTGGGCGTGCTCATCTTCGCTCTGGCAATTCATCTCTTTCATCAGATGGTCTAA 906 52.76 WFAFLTYRYELAGVLSTTFTIANKCDYTVWPGILSNAGVAPLSTTGFVLQTGESKIITAPTSWGGRFWGRTHCSEDDSGKFSCVTGDCGSNKLECAGNGAAPPATLAEFTLDGSGGLDFFDVSLVDGYNLPMMVVPQGGTGEKCTSTGCVVDLNSACPSELKVTSVDGSESVACKSACEAFGKPEYCCNGAYSTPDTCQPSSYSQMFKTACPRAYSYAYDDTASTFTCASADYIITFCPSPTTSQKSSQGPATNGTMVYEGAESDQSGASPLSAVGIFSGANSLVGVLIFALAIHLFHQMV 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1672685 1674043 + Bpe014963.1 Bpe04g00250 102059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00250 301 CDD TLP-PA 18 238 - -
Bpe04g00250 301 PRINTS Pathogenesis-related protein signature 118 134 IPR001938 -
Bpe04g00250 301 PRINTS Pathogenesis-related protein signature 66 77 IPR001938 -
Bpe04g00250 301 PRINTS Pathogenesis-related protein signature 229 238 IPR001938 -
Bpe04g00250 301 PRINTS Pathogenesis-related protein signature 18 30 IPR001938 -
Bpe04g00250 301 Gene3D Thaumatin 17 239 IPR037176 -
Bpe04g00250 301 Pfam Thaumatin family 23 239 IPR001938 -
Bpe04g00250 301 PANTHER BNAA02G17480D PROTEIN 11 262 - -
Bpe04g00250 301 PANTHER OS03G0233200 PROTEIN 11 262 IPR001938 -
Bpe04g00250 301 SMART tha2 19 239 IPR001938 -
Bpe04g00250 301 ProSiteProfiles Thaumatin family profile. 16 239 IPR001938 -
Bpe04g00250 301 SUPERFAMILY Osmotin, thaumatin-like protein 17 240 IPR037176 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01730 Bpe04g00250 CCT
Bpe04g00250 Bpe05g00142 CCT
Bpe04g00250 Bpe05g00142 ECH
Bpe02g01730 Bpe04g00250 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00250 Bpe-Chr4:1672685 Bpe06g00130 Bpe-Chr6:2250709 7.27E-111 dispersed
Bpe03g01271 Bpe-Chr3:31262551 Bpe04g00250 Bpe-Chr4:1672685 8.06E-14 transposed
Bpe11g00622 Bpe-Chr11:4776667 Bpe04g00250 Bpe-Chr4:1672685 1.57E-82 transposed
Bpe14g01332 Bpe-Chr14:10543774 Bpe04g00250 Bpe-Chr4:1672685 3.86E-117 transposed
Bpe10g00159 Bpe-Chr10:3831886 Bpe04g00250 Bpe-Chr4:1672685 4.10E-99 wgd
Bpe02g01730 Bpe-Chr2:19741008 Bpe04g00250 Bpe-Chr4:1672685 6.80E-131 wgd
Bpe02g00343 Bpe-Chr2:2249606 Bpe04g00250 Bpe-Chr4:1672685 3.35E-68 wgd
Bpe04g00250 Bpe-Chr4:1672685 Bpe05g00142 Bpe-Chr5:3708511 9.12E-93 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00250 - - zju:107420415 466.077