Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00030 ATGAAGGTCCATCAATTCGTACGTGGGTTTTGGGAGCTCGAACCACCCTCCCTCTCCCTCGCCTGCAAGCGTCTCCGTCCTCTCGCTCCGAAGCTTCAAACCAACAATGACTCCACAATCTCCTCCTTCGATCTCAAGACCTTCATCAGACCGGACTCGGCCCCCAGACCAAACCCTTCTTCTTCCTTCTCCTCAGAAGACAAGAGAGATTTAATTCCTGTGGAGACTCTTCCTGGAGGGACAAGGTGGAACCCGACTCAAGAACAGATTGGGATATTGGAGATGCTTTACAGGGGAGGAATGAGGACTCCTAATGCACAACAGATAGAGCAAATCACAACCCAGCTAGGTAAATATGGCAAAATCGAAGGTAAAAATGTATTTTATTGGTTTCAGAACCACAAAGCCCGAGAAAGACAGAAGCAAAAGAGAAACAGTCTTGGTCTTTGCCATAGCCCAAGAACAGCTGTAGCAAATTGTAGGGTAGAGGGAGTAGAACATCAAAGAGAGGAAGATAGTTCGTTCAAGAGAAAGAACAGGAGCTGGGTATTTGAATGCTTGGAAGAAGAGATCATCAGCGTAAGCCATGAAGAAGAAGATCAAGGAGATGGAACTTTGGAGTTATTTCCATTACACCCAGAAGGTAGATGA 651 46.24 MKVHQFVRGFWELEPPSLSLACKRLRPLAPKLQTNNDSTISSFDLKTFIRPDSAPRPNPSSSFSSEDKRDLIPVETLPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITTQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLCHSPRTAVANCRVEGVEHQREEDSSFKRKNRSWVFECLEEEIISVSHEEEDQGDGTLELFPLHPEGR 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 583855 584674 - Bpe025779 Bpe05g00030 103807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00030 216 MobiDBLite consensus disorder prediction 48 80 - -
Bpe05g00030 216 Gene3D - 80 147 - -
Bpe05g00030 216 Pfam Homeodomain 81 140 IPR001356 GO:0003677
Bpe05g00030 216 SUPERFAMILY Homeodomain-like 79 146 IPR009057 -
Bpe05g00030 216 MobiDBLite consensus disorder prediction 196 216 - -
Bpe05g00030 216 CDD homeodomain 81 142 IPR001356 GO:0003677
Bpe05g00030 216 ProSiteProfiles 'Homeobox' domain profile. 86 141 IPR001356 GO:0003677
Bpe05g00030 216 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 216 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Bpe05g00030 216 SMART HOX_1 78 145 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00030 Bpe-Chr5:583855 Bpe13g00375 Bpe-Chr13:11501936 2.42E-28 dispersed
Bpe01g00137 Bpe-Chr1:809544 Bpe05g00030 Bpe-Chr5:583855 7.29E-34 transposed
Bpe15g01254 Bpe-Chr15:21022524 Bpe05g00030 Bpe-Chr5:583855 3.48E-27 transposed
Bpe02g01798 Bpe-Chr2:20240886 Bpe05g00030 Bpe-Chr5:583855 1.65E-83 wgd
Bpe02g01798 Bpe-Chr2:20240886 Bpe05g00030 Bpe-Chr5:583855 1.65E-83 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21401 PF00046 Homeodomain 6.50E-19 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00030 - - twl:120000509 297.36