Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00142 TTTGATCAGATCTTTCCGGTTTTTTTCATTCTTTTATCTTGTTTTGAAGGTATTTCAGGGGCTTTATTTACCATAGTAAACGAATGCCAGTTCACTGTATGGCCTGGAGTTCTCGGAAACTCACAGTTGGAGACCACCGGCTTCGAACTCCGACAGGGAGGCTCCCGCTCTTTCCAGCTCCCACCGGGCTGGTCAGGTAGAGTCTGGGGGAGATCCGGTTGTACATTTGACCAGAGTAGCGGCCAGGGTAGCTGCCTCACCGGCCACTGCGGCTCCAACCAGATTGAATGCAACGGTTACGGAGCGATCCCACCTGCAACTTTGGTGGAGTTCACTATAGGGTCCGGTACAACCCTGGACTTTTACGATGTGAGCTTAGTCGACGGCTACAATCTCCCCATTATCGTCGAACCCTCAGGGGGGTCGGGTTCGTGTATGTCAACCGGATGCGTGACCGACTTAAATCTCCGGTGCCCGGCAGAGCTGCGATCAGGAGAGGGAACTGCGTGTAGAAGCGCGTGTGAAGCGTTCGGGAATCCTGAATACTGCTGCAGCGGCGCGTACGGTTCACCGGCGACCTGTAAGCCGTCGATCTACTCGGCGATTTTCAAATCGGCTTGTCCGAGATCGTATAGCTACGCTTATGACGATGCGACGAGCACATTTACGTGCGGTGGAGCCGATTACAGTATTACATTCTGCCCTTCGTCATCAAGGCAAGCTTCCTTTCCTTTCTCCTATTCTCTCCCTTTTCGATTTTCTTTTCTTTAA 771 52.14 FDQIFPVFFILLSCFEGISGALFTIVNECQFTVWPGVLGNSQLETTGFELRQGGSRSFQLPPGWSGRVWGRSGCTFDQSSGQGSCLTGHCGSNQIECNGYGAIPPATLVEFTIGSGTTLDFYDVSLVDGYNLPIIVEPSGGSGSCMSTGCVTDLNLRCPAELRSGEGTACRSACEAFGNPEYCCSGAYGSPATCKPSIYSAIFKSACPRSYSYAYDDATSTFTCGGADYSITFCPSSSRQASFPFSYSLPFRFSFL 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3708511 3709281 + Bpe017529.1 Bpe05g00142 103919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00142 256 ProSiteProfiles Thaumatin family profile. 20 235 IPR001938 -
Bpe05g00142 256 SMART tha2 23 235 IPR001938 -
Bpe05g00142 256 PANTHER THAUMATIN-LIKE PROTEIN 1 13 242 - -
Bpe05g00142 256 Pfam Thaumatin family 27 235 IPR001938 -
Bpe05g00142 256 Gene3D Thaumatin 21 235 IPR037176 -
Bpe05g00142 256 PANTHER OS03G0233200 PROTEIN 13 242 IPR001938 -
Bpe05g00142 256 SUPERFAMILY Osmotin, thaumatin-like protein 22 236 IPR037176 -
Bpe05g00142 256 PRINTS Pathogenesis-related protein signature 120 136 IPR001938 -
Bpe05g00142 256 PRINTS Pathogenesis-related protein signature 225 234 IPR001938 -
Bpe05g00142 256 PRINTS Pathogenesis-related protein signature 46 55 IPR001938 -
Bpe05g00142 256 PRINTS Pathogenesis-related protein signature 22 34 IPR001938 -
Bpe05g00142 256 PRINTS Pathogenesis-related protein signature 67 78 IPR001938 -
Bpe05g00142 256 CDD TLP-PA 23 234 - -
Bpe05g00142 256 PIRSF PR5 3 249 IPR001938 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g00250 Bpe05g00142 CCT
Bpe04g00250 Bpe05g00142 ECH
Bpe02g01730 Bpe05g00142 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00142 Bpe-Chr5:3708511 Bpe15g00474 Bpe-Chr15:16079990 8.44E-80 dispersed
Bpe13g00412 Bpe-Chr13:11815395 Bpe05g00142 Bpe-Chr5:3708511 2.19E-53 dispersed
Bpe07g00722 Bpe-Chr7:13780997 Bpe05g00142 Bpe-Chr5:3708511 1.82E-57 transposed
Bpe02g01730 Bpe-Chr2:19741008 Bpe05g00142 Bpe-Chr5:3708511 1.17E-87 wgd
Bpe02g00343 Bpe-Chr2:2249606 Bpe05g00142 Bpe-Chr5:3708511 9.20E-44 wgd
Bpe04g00250 Bpe-Chr4:1672685 Bpe05g00142 Bpe-Chr5:3708511 9.12E-93 wgd
Bpe05g00142 Bpe-Chr5:3708511 Bpe06g00130 Bpe-Chr6:2250709 1.15E-84 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00142 - - jre:109003887 384.03