Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00538 ATGAGCTGTTCTTGCGATCTTCTCGAAACTTGTTGCAGTTCGATCTTTGGATTACCATACTTGACCATGGACGTTGGAGGATTTTCAGGAGGTGGAGTACTTCAATGCGTTTCTCGATTGGTTTTCTGCGCGGTTTCTCGAGCCCTGGTGGCTTTTTTCGCGATAGGTGGAGCTTTTGCAGGAGCCATTGCTGGTGGTTTAGCAGGTAGGGTTTCAAATTGTGGTGTTTTTCGTGGGGCTGCATTGGGTGCTCTTGCTGGGGCTGTTCTTTCTGTAGAGGTTTTGGAGGCTTCCCCTTCCTACTGGTGTCTCCAACAATCTGCTTCTCGCCCCTCGTTAGCCATGGCCGATTTCATCGAGGAGCTTCTTCGCCGGAGATTCGTAGAGGATGATTTTACTCCGGCAATGTTAACTGCTTACCGGCGGCAGCATTGCTATGTAAGTTATGAAGAGATCCACAATATGTTTGGGGGAGTTGCATGCGGAGGATCATCAGGCGATTCACCGAGAAAACTACCATGCCATGTTTTGATCGAGGAAATTAAGCCGGACCAGAGCACCTGCTGCGCAATTTGTTTGCAGGTCATTTTTCGAGATCACACGATGCTTAATTCTCACTTCTCGATTTCAAGAAACTTGCATTCTTTAGTTTGA 654 47.71 MSCSCDLLETCCSSIFGLPYLTMDVGGFSGGGVLQCVSRLVFCAVSRALVAFFAIGGAFAGAIAGGLAGRVSNCGVFRGAALGALAGAVLSVEVLEASPSYWCLQQSASRPSLAMADFIEELLRRRFVEDDFTPAMLTAYRRQHCYVSYEEIHNMFGGVACGGSSGDSPRKLPCHVLIEEIKPDQSTCCAICLQVIFRDHTMLNSHFSISRNLHSLV 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 11251860 11253962 - Bpe005804.1 Bpe12g00538 112551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00538 217 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 33 203 - -
Bpe12g00538 217 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 33 203 IPR044523 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00772 Bpe12g00538 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00538 Bpe-Chr12:11251860 Bpe06g00140 Bpe-Chr6:2509541 1.42E-22 dispersed
Bpe12g00538 Bpe-Chr12:11251860 Bpe07g00772 Bpe-Chr7:14216080 3.38E-38 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00538 - - jre:109013304 171.785