Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00169 ATGTGCCGGAGTGACGAAGTCGATGCGGTTGACCATCGTCTGAGTCTTTTATCAGAGGTTCGGCTTCCTGCAACCCCCGGCGACGACTCCGATGGAGATGGGGATGCCCTCTTCATTCCTCCTCTCAACTTCTCGGCCGTCGACGCCGGCATTTTTCGCTCCGGCTTCCCTCATGACGCAAACTTCTCTTTCATTCAAACCCTAGGCCTCCGCTCCATCATATACCTTTGTCCGGAGCCTTATCCTGATTCAAATATGGAGTTTCTCAAGTCTAATGGAATCAAATTGTATCAATTCGGCATCGAAGGACATAAGGAGCCATTTGTAAACATCCCAGAGAATAAAATTCGTGAAGCACTGAGAGTTGTTCTTGATTCAAGGAATCACCCGCTTCTAATTCACTGTAAACGAGGAAAGCATCGAACTGGTTGTTTGGTGGGATGCCTGAGGAAAATGCAGAGATGGTGCTTATCGTCTGTATTTTCTGAGTACCAGCGATTTGCAGCGGCTAAAGCTAGAGTTTCTGATCAGAGGTTCATTGAAGTTTTTGATGTTTCTGCCTTAAAACCATCTTCCCATGACTCTTCCTAG 591 46.87 MCRSDEVDAVDHRLSLLSEVRLPATPGDDSDGDGDALFIPPLNFSAVDAGIFRSGFPHDANFSFIQTLGLRSIIYLCPEPYPDSNMEFLKSNGIKLYQFGIEGHKEPFVNIPENKIREALRVVLDSRNHPLLIHCKRGKHRTGCLVGCLRKMQRWCLSSVFSEYQRFAAAKARVSDQRFIEVFDVSALKPSSHDSS 196
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 12184162 12185720 + Bpe001106.1 Bpe15g00169 115848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00169 196 CDD PFA-DSP_Siw14 37 184 - -
Bpe15g00169 196 Pfam Tyrosine phosphatase family 39 193 IPR004861 -
Bpe15g00169 196 Gene3D Protein tyrosine phosphatase superfamily 37 187 IPR029021 -
Bpe15g00169 196 PRINTS Plant and fungal dual specificity phosphatase signature 94 108 IPR020428 GO:0016791
Bpe15g00169 196 PRINTS Plant and fungal dual specificity phosphatase signature 111 125 IPR020428 GO:0016791
Bpe15g00169 196 PRINTS Plant and fungal dual specificity phosphatase signature 75 88 IPR020428 GO:0016791
Bpe15g00169 196 PRINTS Plant and fungal dual specificity phosphatase signature 38 55 IPR020428 GO:0016791
Bpe15g00169 196 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 39 184 IPR029021 -
Bpe15g00169 196 PANTHER - 22 190 - -
Bpe15g00169 196 PANTHER TYROSINE-PROTEIN PHOSPHATASE 22 190 - -
Bpe15g00169 196 ProSitePatterns Tyrosine specific protein phosphatases active site. 133 143 IPR016130 GO:0016311|GO:0016791
Bpe15g00169 196 ProSiteProfiles Dual specificity protein phosphatase domain profile. 43 196 IPR020422 GO:0006470|GO:0008138
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe14g00621 Bpe15g00169 CCT
Bpe12g00275 Bpe15g00169 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe14g00621 Bpe-Chr14:5131870 Bpe15g00169 Bpe-Chr15:12184162 1.92E-97 dispersed
Bpe14g00022 Bpe-Chr14:430444 Bpe15g00169 Bpe-Chr15:12184162 1.91E-73 transposed
Bpe12g00275 Bpe-Chr12:2961721 Bpe15g00169 Bpe-Chr15:12184162 4.42E-101 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00169 K18045 - ming:122083976 295.434