Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00427 ATGGAAGTGGGTTATAATTCACAAAATAGGGAGTCTTCGTCCAAGCTGACTTCTACAGCCTTTGCTCAAACAGTTGAAGAAAAAACAAGCGATGAAACAATTCAACACGGAGAGACAGCTTCCAATCCTCCTCAAACCCTAGACCAGAATTACCTCACTTATCATCTTCATCACCACCATCATTTTCCTCACAGCCGACAATTGAATCCTTCTCCAGAAATTTCCTGCAAATACAGCAAAGATCCACACCCCAACCGGCCAGATCTGGGGCCAGCTCCTACTACTCCACTGCCCGGAAGATTGAACTCGAAAACACCATCGCAACCTGGAGCTTCGACCAGTGTAACTATTTCCTCTCCCGTTCGATATCGAGAATGTTTAAAGAACCATGCGGCGAGTATGGGCGGGTACGTTCTCGATGGATGCGGAGAATTCATGCCAAACGGAGAACAAAACAGTAGAGAAGGTTTGAAATGTGCGGCCTGCGATTGCCATCGTAACTTTCACCGGAAAGAGACCGACGGCGAGCCGCCAGATCCGTCTTCGGCGAACTTTTACTACCCCTACAGCTCGAACAACACCACCACACGAAGGAGCAATCAAAGAATGGTTCCTACACCATCCCATCTCTACCACCAGGGACCACTCTCTCTCGGGCCACCGGCGCTGATGATGATGGCCTTTGGAAGTTCCAGTGGAGCTGCAGCGGAGTCTTCAAGCGAAGATCTAGCTATGGGACATCAACCACAATCATCAAAAAAGCGGTTTCGGACAAAATTCACAAATGAACAGAAAGATAAGATGATGGAGCTCGCTGAAAAACTGGGATGGAAGATTCAGAAGCATGATGAAGAAGAGGTGCAGCAGTTCTGTACAGAAGCGGGCGTAAAGAGGCAGGTTTTCAAGGTATGGATGCATAACAACAAGCCAACCATAAAAAAACATCAAATGTAA 954 47.38 MEVGYNSQNRESSSKLTSTAFAQTVEEKTSDETIQHGETASNPPQTLDQNYLTYHLHHHHHFPHSRQLNPSPEISCKYSKDPHPNRPDLGPAPTTPLPGRLNSKTPSQPGASTSVTISSPVRYRECLKNHAASMGGYVLDGCGEFMPNGEQNSREGLKCAACDCHRNFHRKETDGEPPDPSSANFYYPYSSNNTTTRRSNQRMVPTPSHLYHQGPLSLGPPALMMMAFGSSSGAAAESSSEDLAMGHQPQSSKKRFRTKFTNEQKDKMMELAEKLGWKIQKHDEEEVQQFCTEAGVKRQVFKVWMHNNKPTIKKHQM 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15790946 15791899 - Bpe001363.1 Bpe15g00427 116106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00427 317 MobiDBLite consensus disorder prediction 1 116 - -
Bpe15g00427 317 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 122 172 IPR006456 -
Bpe15g00427 317 SUPERFAMILY Homeodomain-like 241 315 IPR009057 -
Bpe15g00427 317 Pfam ZF-HD protein dimerisation region 121 173 IPR006456 -
Bpe15g00427 317 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 7 57 315 - -
Bpe15g00427 317 Gene3D - 237 314 - -
Bpe15g00427 317 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 57 315 - -
Bpe15g00427 317 MobiDBLite consensus disorder prediction 1 28 - -
Bpe15g00427 317 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 123 172 IPR006456 -
Bpe15g00427 317 MobiDBLite consensus disorder prediction 98 116 - -
Bpe15g00427 317 MobiDBLite consensus disorder prediction 35 52 - -
Bpe15g00427 317 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 253 309 IPR006455 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe13g00443 Bpe15g00427 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00095 Bpe-Chr6:1408916 Bpe15g00427 Bpe-Chr15:15790946 3.89E-55 dispersed
Bpe13g00293 Bpe-Chr13:10801361 Bpe15g00427 Bpe-Chr15:15790946 3.26E-22 dispersed
Bpe14g00177 Bpe-Chr14:2140419 Bpe15g00427 Bpe-Chr15:15790946 1.30E-49 dispersed
Bpe15g00427 Bpe-Chr15:15790946 Bpe15g00243 Bpe-Chr15:13724554 1.07E-40 dispersed
Bpe02g00132 Bpe-Chr2:905065 Bpe15g00427 Bpe-Chr15:15790946 2.85E-57 transposed
Bpe13g00443 Bpe-Chr13:11967088 Bpe15g00427 Bpe-Chr15:15790946 4.94E-149 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22569 PF04770 ZF-HD_dimer 2.10E-29 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00427 - - qsu:111998832 288.885