Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g2045 ATGCCGAGAAAAGGAATGAGGAGTCTCCTTTTCCAGTTCTCGTCGCCGTCGAATTCCATTTCCAGGTATTCCATCTCGTCGCCGTCCAGAACTCCGGCATCGACTCCACGCCGGAGCTTCAACGACGCGATGATCGAACAGAGCATCGAATCTGCCGCGGCGATTGTGATGAAATGGAATCCAGATTCTTCAACGTACGCCAAAGTTACTTCCATGTTCTATGAAGACAAAAGAGAAGCCATGCAGTTCATTAAGCGTGTGAATGATCTTCAAAAAGCGATGCATCTTATTGCTTCGGAAGATTCCGCTTCCGCTTCCGATCGCCTTGTTTACGCTCAAACTTTGATGGAAATCGCCATGAAAAGACTTCAGAAGGAGTTTTATCAGATTCTCTCCATGAATCGTGCTCATCTAGATCCGGAATCTGTTTCCACTAGATCCTCTCGCTGCTCCACCAGATCGAGCACTTCCGTTGATTTCGACGATGACGGAACCCTAGACGATGAAATCCAAGCCATAGACGATTCGATCTCTGAAGTTGAGCAAGTTTCTTTCATTGTAATGGAGGATTTACGAGCCATAGCCGAGTGTATGATCTCCTCTGGCTACGCTAAAGAATGCGTTAATATGTATAAAGTGATTCGAAAATCGATTATCGATGAAGGTGTGTACCGCCTCGGACTTGAGAAATTGAGCGCTTCGAGAATCAACAAAATGGATTGGGAGGTGCTTGATCTTAAAATCAAGAACTGGTTGGATGCAATTAAACTCGCAATTAGAACGTTGTTCGTTGGCGAACGAATTCTCTGTGATCACGTCTTTTCCTCTTCTGAATCCATTAGAGAATCATGTTTTGCTGATATATCTAGAGAAGGCGCTCTGCTTCTGTTTGGATTCCCTGAACTTGTTGCAAAGAGTAAAAAGTCTCCGGAAAAAATGTTCCGTGTTCTTGATATGTACTCATCAATCTCCGAAAATTGGCCGGACATCGAATCGATTTTCTCGTCTGAATCCTCATCTGTAGTTCGATCTCAAGCTCTAACCTCACTCGCGAAACTCGGCGAGTTAGTCCGGGCCATAGTTATGGATCTCGAAGTCTCGATTCAGAAAAACTCATCCAAATCGCCGGTTGCTGGGGGTGGCGTTCATTCCTTAACGCTTCTCTCGATGAACTACCTCACTTTCCTCGCCGATTACGGCAATATTTTGACGGATATTTTCGCTGATTGGACTCCGCCTGAAAAATCCTCTCTCGAACAAATCTTCTTCAACAGTTCAGAATCCGACGATTCTCCAACGGCTTCAGCAATCTCTTTACGAATGGGATGGCTAATTCTAGTCCTCCTCTGCAAACTCGACAGCAAAGCAAAGCGCTACAAAGACGTTTCACTCTCGTATCTGTTCCTCGCTAACAATCTTCAACACATCGTCTCTAAAGTCCGATCGTCGAATCTTCAGTACCTTCTCGGTGACGAGTGGATCACGAAGCAGGAGGCGAAAGTAAGGCAATTCGCGGCGAAGTACGAAGCATTGGCTTGGGGAAGAGTCTTCGATTCTTTGCCGGAGAATCCAACTGAGAGATTCTCACAGGAAGAAGCCAAAGAAATCTTCAGGAATTTCAATATGGCATTCCAAGAAACTCATCGGAAACAGAAATCTTTCTTCATTCCTGATTCAAAGCTTAGAGACGAAGTTAAATTATCAATCGGTAGAAAGCTTGTTTGGTTCTATGGAGAATTTTACAGAGCGCAAAAAGCTTATGCTGGTGGTAATGAAAAGCCGTACATCAGATTCTCCCCGGAAGATATCGGTAACTACCTTTCAGATCTCTATTTTGAACCGTCCGATTGGGCGAGCGTTTCCACCTCGTCGCCGTCGTCCACCTCCTCCTCTCACCGGCGGGAACCGGGACCCCGTTAA 1920 45.47 MPRKGMRSLLFQFSSPSNSISRYSISSPSRTPASTPRRSFNDAMIEQSIESAAAIVMKWNPDSSTYAKVTSMFYEDKREAMQFIKRVNDLQKAMHLIASEDSASASDRLVYAQTLMEIAMKRLQKEFYQILSMNRAHLDPESVSTRSSRCSTRSSTSVDFDDDGTLDDEIQAIDDSISEVEQVSFIVMEDLRAIAECMISSGYAKECVNMYKVIRKSIIDEGVYRLGLEKLSASRINKMDWEVLDLKIKNWLDAIKLAIRTLFVGERILCDHVFSSSESIRESCFADISREGALLLFGFPELVAKSKKSPEKMFRVLDMYSSISENWPDIESIFSSESSSVVRSQALTSLAKLGELVRAIVMDLEVSIQKNSSKSPVAGGGVHSLTLLSMNYLTFLADYGNILTDIFADWTPPEKSSLEQIFFNSSESDDSPTASAISLRMGWLILVLLCKLDSKAKRYKDVSLSYLFLANNLQHIVSKVRSSNLQYLLGDEWITKQEAKVRQFAAKYEALAWGRVFDSLPENPTERFSQEEAKEIFRNFNMAFQETHRKQKSFFIPDSKLRDEVKLSIGRKLVWFYGEFYRAQKAYAGGNEKPYIRFSPEDIGNYLSDLYFEPSDWASVSTSSPSSTSSSHRREPGPR 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34275454 34277373 - CaPI482276_10g020450.1 Cam10g2045 138708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g2045 639 FunFam Exocyst subunit Exo70 family protein 66 618 - -
Cam10g2045 639 Gene3D Exocyst complex component Exo70 56 617 - -
Cam10g2045 639 Pfam Exocyst complex component Exo70 N-terminal 49 132 - -
Cam10g2045 639 Pfam Exo70 exocyst complex subunit C-terminal 249 609 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cam10g2045 639 MobiDBLite consensus disorder prediction 617 639 - -
Cam10g2045 639 SUPERFAMILY Cullin repeat-like 75 611 IPR016159 -
Cam10g2045 639 PANTHER EXOCYST COMPLEX PROTEIN EXO70 47 612 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cam10g2045 639 MobiDBLite consensus disorder prediction 18 38 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g2134 Cam-Chr2:34116291 Cam10g2045 Cam-Chr10:34275454 5.50E-178 dispersed
Cam03g0199 Cam-Chr3:2957541 Cam10g2045 Cam-Chr10:34275454 1.60E-164 dispersed
Cam10g2045 Cam-Chr10:34275454 Cam11g0630 Cam-Chr11:7839865 5.70E-13 dispersed
Cam01g0878 Cam-Chr1:10264630 Cam10g2045 Cam-Chr10:34275454 1.00E-71 transposed
Cam10g2045 Cam-Chr10:34275454 Cam02g1412 Cam-Chr2:26826600 1.70E-142 wgd
Cam10g2045 Cam-Chr10:34275454 Cam04g0872 Cam-Chr4:22871921 3.80E-142 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g2045 K07195 - csv:101208543 1100.89