Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car04g01766 | ATGCCGCCTTCTTCAAACAATACTTCAAACAATACTTCGAACGATACTTCGAACGATACTTCAAACGATACCTCAAAGGATACTTCAAACGATACTTCAAACGATACTTCAAAGGATACTTCAAAGGATACTTCAAACGATACTTCAAAGGATACTTCAAACGATACTTCCAACGATACTTCCAACGATACTTCAAACGATACTTCAAACGATACTTCTTCTCCTACATCGGATTTTGTTTCAAATTCAAGTTTGCCGCCTGAAGCTCCGGATTCTTCTTCTTATTCTCCGCCGCCGCAATCAAATGACTTTACAACGTTCCCACTTAATAAAGCCGATGCTCCTGACCCGTCGTTTGTGTCATCGTCAATTGAAGCTCCACCTGCCGACCACGAAGGTTCACCATCTTCCTCACCGTCAGCTTCTCCGGAACCTGAAAGGACATCGCTCGCCCCTACTATCGCCTCCAATTTAATTGCATTCGACGAGAGTCCGCCATCGCCTAAAGTTTCTGCTTCACCACCGCCGTCTCCCCAGCCTCCTCCACCGCCGCCTCATCCACCACCACCACCTTCACCATTGCCTTCACCACCGCCTCCACAACTGCCTCCAGAACAGTCGGATGACGTTATCGTCGTCGATCCTCCACCTGCCCCTGTTCCGACCAAGAAAAAATCTTCGGAACATCGAGGAAGTCCACCTTCTCCAATATCTGAGAATGATTCCCCTGATGTGGCGAATGAAAGCACCGATCGGGGTTCTAAAAAAGCCAAGGAGCCTCCGCCATCTGAATCGACGGATCCTCTTCCTTCACCAGAAAGTCCGGACGTGATTCCTTCACCAGGTGCAAACTCGGCGAAGGGGGAACGAACTCGGAGTCCACCTCCAGAAACAATTTCTCCCGCACCAGAGGATAACATTCCTTCACCTCCCATAGTCACATCCGCTCGCGCTCCAAACAACTCACCTCCTTTTATCGACTCAACGCCCGTGAAATCAACATTGGGGCAGTCCAATGCACCATCGTCTGTTTCAAGTAGTCACACTGATATTGCAGTAGGCGCTGCAGTCATTGGAGTTTTCGTAATCGCTTTGGTTGCTGTGATTTTTGTGTTACTAAGGAAGAAGAAAAGACAGGGAAACATGTATGGGGGCCCCTACACGCCTCCTAATAACTACGGTGCTAAATCAGATGGAAATTACTATCCACATCAACATATGGGCAATTCTGGCTCTGCTGAAGGCTTCTACACTCAGGTCCCACATACTCCGGTTGGAAATAGCTTTGGGAGTCAAAAAGGAACAGGATCCAGTGGCAGTGGAGCAGACTCAGGTGTGATAAACAGTGCTAAGTTCGTCTTTAGCTATGAGGAATTGATGGAGATTACGTCTGGATTTTCGCGTCAAAACATTCTTGGGGAAGGTGGGTTTGGATGTGTCTACCAGGGTTGGCTTCCGGCAGGGAGGTCAGTGGCTGTGAAGCAACTCAAGGCAGGAAGTGGACAGGGGGAGAGGGAATTCAAGGCGGAAGTTGAGATTATCAGTCGTGTTCATCATCGGCATTTGGTGTCTTTAGTGGGCTACTGCGTCTCTGAGCATCATAGATTGCTCATCTATGATTTTGTTCCCAATAAGACTCTTGAGCATCATCTCCATGGCGATTTTGGACTTGCAAAATTGACAAACGATACAAACACCCACGTTTCGACTCGTGTCATGGGGACATTTGGGTGGGCTCGTCCACTCCTCCTTCACACCCTTGAAACTGGGGTTTTTGACGGATTGATAGATCCACGCCTTGGAAAACAGTATGTGGAAAGTGAAATGTTCAGAATGATCGAAGCAGCAGCTGCCTGCGTTCGTCATTCGGCTCCCAAAAGGCCTCGCATGGTTCAGGTGGTGAGATCACTAGATATTGAAACAGACATGTCTGACCTCTCCAATGGTGTCAAATATGGCCAGAGCACCATCTATGATTCTGGACAATACAGTCAAGACATCTCTAAATTCAGGAGAATGGCGCTTGGTGGAGACAGCTCCGAATTCGACATTTACAGTAGCGAATACAGTTCCAGAGAAATGAATGCAAGTGGGGAATCATGGAGATTCGAAAACAACTCAAGCGGTGAATCAGAAACTCGAGCTTTTCACGGACGAACTGGCGCACCACAAAGTCACCCTAGCGGTCGACAATTCTAA | 2199 | 47.89 | MPPSSNNTSNNTSNDTSNDTSNDTSKDTSNDTSNDTSKDTSKDTSNDTSKDTSNDTSNDTSNDTSNDTSNDTSSPTSDFVSNSSLPPEAPDSSSYSPPPQSNDFTTFPLNKADAPDPSFVSSSIEAPPADHEGSPSSSPSASPEPERTSLAPTIASNLIAFDESPPSPKVSASPPPSPQPPPPPPHPPPPPSPLPSPPPPQLPPEQSDDVIVVDPPPAPVPTKKKSSEHRGSPPSPISENDSPDVANESTDRGSKKAKEPPPSESTDPLPSPESPDVIPSPGANSAKGERTRSPPPETISPAPEDNIPSPPIVTSARAPNNSPPFIDSTPVKSTLGQSNAPSSVSSSHTDIAVGAAVIGVFVIALVAVIFVLLRKKKRQGNMYGGPYTPPNNYGAKSDGNYYPHQHMGNSGSAEGFYTQVPHTPVGNSFGSQKGTGSSGSGADSGVINSAKFVFSYEELMEITSGFSRQNILGEGGFGCVYQGWLPAGRSVAVKQLKAGSGQGEREFKAEVEIISRVHHRHLVSLVGYCVSEHHRLLIYDFVPNKTLEHHLHGDFGLAKLTNDTNTHVSTRVMGTFGWARPLLLHTLETGVFDGLIDPRLGKQYVESEMFRMIEAAAACVRHSAPKRPRMVQVVRSLDIETDMSDLSNGVKYGQSTIYDSGQYSQDISKFRRMALGGDSSEFDIYSSEYSSREMNASGESWRFENNSSGESETRAFHGRTGAPQSHPSGRQF | 732 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 10109406 | 10112635 | + | Carg14339-RA | Car04g01766 | 147191 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car04g01766 | 732 | ProSitePatterns | Protein kinases ATP-binding region signature. | 472 | 494 | IPR017441 | GO:0005524 | |
| Car04g01766 | 732 | MobiDBLite | consensus disorder prediction | 313 | 346 | - | - | |
| Car04g01766 | 732 | Pfam | Protein tyrosine and serine/threonine kinase | 469 | 554 | IPR001245 | GO:0004672|GO:0006468 | |
| Car04g01766 | 732 | MobiDBLite | consensus disorder prediction | 133 | 155 | - | - | |
| Car04g01766 | 732 | MobiDBLite | consensus disorder prediction | 693 | 732 | - | - | |
| Car04g01766 | 732 | MobiDBLite | consensus disorder prediction | 263 | 277 | - | - | |
| Car04g01766 | 732 | MobiDBLite | consensus disorder prediction | 50 | 108 | - | - | |
| Car04g01766 | 732 | MobiDBLite | consensus disorder prediction | 245 | 262 | - | - | |
| Car04g01766 | 732 | MobiDBLite | consensus disorder prediction | 693 | 714 | - | - | |
| Car04g01766 | 732 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
| Car04g01766 | 732 | MobiDBLite | consensus disorder prediction | 168 | 205 | - | - | |
| Car04g01766 | 732 | ProSiteProfiles | Protein kinase domain profile. | 466 | 732 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Car04g01766 | 732 | MobiDBLite | consensus disorder prediction | 1 | 346 | - | - | |
| Car04g01766 | 732 | MobiDBLite | consensus disorder prediction | 32 | 49 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car04g01766 | Car18g00729 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car04g01766 | Car-Chr4:10109406 | Car15g00207 | Car-Chr15:1142382 | 2.73E-91 | dispersed | |
| Car18g00985 | Car-Chr18:10354626 | Car04g01766 | Car-Chr4:10109406 | 1.00E-82 | wgd | |
| Car18g00729 | Car-Chr18:8428061 | Car04g01766 | Car-Chr4:10109406 | 0 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 88821 | PF07714 | PK_Tyr_Ser-Thr | 3.00E-13 | CL0016 | Car | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car04g01766 | - | - | cpep:111803284 | 807.749 |