Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00579 ATGACGGATTACCGATTTTCCACCATGAATCTCTGGACCGACGAGAACGCGTCGGCCATGGATGCTTTCACGAACTCCGATCTGTCTTCTTACTGGGCTCCGTCGGCGGCGTCGCCTCAATCTCTCCACCACCCACCTCCGACGCAATCCTCCGCCTCCACCACTACTCCACCGTCCGTCCCTTCCAAGTCTATCGCTGTCTTGAACCAGGAGACTCTGCAGCAGCGCCTCCAGGCGCTCATCGACGGTGCTAGAGAGAGTTGGACGTACGCGATTTTCTGGCAGTCGTCGTATGATTATTCCGGCGGGTCGGTTTTGGGGTGGGGAGATGGGTATTATAAAGGCGAGGAGAATAAAGGGAGAGGAAAAACGAAAATGGTTTCCTCTGCGGCGGAGCAGGCTCACCGGAAGAAGGTGCTCCGGGAGCTTAACTCGTTGATTTCCGGCTCCGCTACCGGACTGGACGATGTGGTGGATGAAGAGGTTACCGACACCGAATGGTTCTTTTTGGTTTCGATGACTCAGTCGTTTGTTAATGGAGTTGGGTTACCGAGTCAGGCGCTTTTAAGCTCCCGGCCGATTTGGATATCCGGCGCCGACCGGCTGTCGGCGTCGGGATGTGATCGCGCTAGACAGGGGAGGATCTTCGGGTTGCAGACGATGGTGTGTATTCCATTACCAAACGGCGTCGTCGAAATGGGTTCGACGGAAGCGATTTACATAACGACGGATTTGATGAACAAGGTCAAGACTCTGTTTAATTTCAACAATCTCGAAACGGGTTCTTGGCAATCGGGAACCACCGGCGTCACCGTCGCCGACGAAGGGGAAAACGACCCATCGTCGTTATGGATCAGTGAGCCGTCGAGCACCATTGAAATGAAGGATTCGATTACCACCACCGTACTTTCCGGCGGCGCGTCAGCTAAGCCAATCCATTCAGAAAATCCCAGTTCGAGCAGCTTAACGGAAAATGCCAGCAGGAAACAGACCCCAAGCTTGAATTTCCCCGATTACGCCGCCGCGGCCGCCACCACGAACCCATCATTCAAGTCGGAATCCGGTGGGATGCTGAGCTTCGGCAACAAAAGTCTCTTCTCCGGTAACTCACAGAATGAGAAAAAGAAATCTCCGACTCGTCGGAGAAGCACCGACGAAGGGATCCTCTGTTTCACCACCGACGCGATCTTACCCTTTTTCGGGAAGGTGAAAATCATGGGGTCTGACGCGATGATCCGAGTTGAATGCAGTAAAAAGAATCATCCGGCTGCGAGATTGATGGCGGCATTGAAGGATTTGGATTTGGAAATGATTCACGCGAGTGTTTCTGTAGTGAATGATTTGATGATTCAACAGGCGGCGGTGAAGATGGAGAGCAGAGTATATACGACGGAGCAGCTGAAAATGGTGCTGATGGCGGAAGTTCGACGGTGCCGGCGTTGA 1443 53.29 MTDYRFSTMNLWTDENASAMDAFTNSDLSSYWAPSAASPQSLHHPPPTQSSASTTTPPSVPSKSIAVLNQETLQQRLQALIDGARESWTYAIFWQSSYDYSGGSVLGWGDGYYKGEENKGRGKTKMVSSAAEQAHRKKVLRELNSLISGSATGLDDVVDEEVTDTEWFFLVSMTQSFVNGVGLPSQALLSSRPIWISGADRLSASGCDRARQGRIFGLQTMVCIPLPNGVVEMGSTEAIYITTDLMNKVKTLFNFNNLETGSWQSGTTGVTVADEGENDPSSLWISEPSSTIEMKDSITTTVLSGGASAKPIHSENPSSSSLTENASRKQTPSLNFPDYAAAAATTNPSFKSESGGMLSFGNKSLFSGNSQNEKKKSPTRRRSTDEGILCFTTDAILPFFGKVKIMGSDAMIRVECSKKNHPAARLMAALKDLDLEMIHASVSVVNDLMIQQAAVKMESRVYTTEQLKMVLMAEVRRCRR 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3330995 3332860 + Carg23384-RA Car06g00579 150315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00579 480 MobiDBLite consensus disorder prediction 305 333 - -
Car06g00579 480 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 73 253 IPR025610 -
Car06g00579 480 MobiDBLite consensus disorder prediction 362 383 - -
Car06g00579 480 MobiDBLite consensus disorder prediction 34 62 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g01373 Car06g00579 CCT
Car06g00579 Car16g01097 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00579 Car-Chr6:3330995 Car06g00850 Car-Chr6:6669385 3.46E-28 dispersed
Car17g00395 Car-Chr17:2621599 Car06g00579 Car-Chr6:3330995 4.18E-15 transposed
Car16g01097 Car-Chr16:9398140 Car06g00579 Car-Chr6:3330995 1.17E-30 wgd
Car19g00192 Car-Chr19:1804983 Car06g00579 Car-Chr6:3330995 1.17E-166 wgd
Car02g01373 Car-Chr2:9070511 Car06g00579 Car-Chr6:3330995 1.66E-23 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00579 K13422 - csv:101205372 605.134