Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00584 ATGGATTCACGGGAGAGGTCGATGCCTTCTGTTCATCAACCTCAGCCACAATCTACTCCACCCAATAGAATGATGGGAAATGCTTCTTATTCCACCAATTTCCCCAACAACAACAACAACAATGCTTCCCCATTGATCAACCCCAATTCCACCGCTGCTCAGATGATGTCATCCGCATCGCGATTTCCCTTCAACTCCATGATGGGTTCTGCTTCTAAGCCTTCGGACTCGCCTAATGCCGGTTCTTATGACGGATCGCAGTCCGAATTGCGTGGTGGTGGCTTCAACATTGATTCCGGGAAGAAGAAGAGAGGCCGTCCGAGGAAGTATTCGCCTGATGGCAACATCGCTTTGGGTTTATCGCCAACCCCCGTCACTTCTTCCGCCGCTCCCGGTGATTCTGCTGGCATGCACTCGGCGGATCCTCGCCCGAAAAAGAACAGGGGACGGCCGCCGGGTACTGGGAAGAAGCAGATGGATGCTTTGGGAACCGGCGGTGTTGGCTTTACCCCTCATGTCATTCTGGTGAAACCCGGAGAGGACATTGCTTCGAAAGTTGTGGCATTTTCACAGCAGGGGCCTCGGACTGTTTGTGTTCTCTCTGCCCATGGTGCTGTCTGCAATGTTACCCTTCACCAACCCACAATGGCAGCTGGCAGTTTTACCCCAAGTATAAAGATATTTCTATTGGTGATCTTCACTCTTGACTCATTAATCCTGAAAAGTAATGGAAAAGAAAAAACCTTTTCTGGCTGTATTATTTCCTTTGAACACAAGGTGTCACCAGTTCTATTGCTTTTTAATCTAATGCAGGGCCGATATGAAATCATCTCTCTATCAGGCAACTTCTTGATTTCTGACAGTAACGGCAATCGAAATCGAACTGGTCGCTTAAGCGTGTCTCTAGCAAGTGCGGATGGACAAGTCCTTGGTGGAATTACCGACATGTTAACAGCAGCATCTACAGTTCAGGTTATAGTGGGTAGCTTTCTTGTGGATGGGAAAAAGCTGGACTCAAGTACACAGAAATCTGGGCCATCTTCTACATCACCCAATATGTTAAACTTCAGTACACCTGCGGCGGCAACAGGCTGCCTCTCTGAAGGTGCATCAAATAACTCATCAGATGACAATGATGGTAGCCCTTTAAGCCGGGCGCCTGGACTCTACACCAATGCCAACCAACCAATTCATAATATGCAGATGTATCAATTGTGGGGTAGTCGAAATCAATAA 1236 47.98 MDSRERSMPSVHQPQPQSTPPNRMMGNASYSTNFPNNNNNNASPLINPNSTAAQMMSSASRFPFNSMMGSASKPSDSPNAGSYDGSQSELRGGGFNIDSGKKKRGRPRKYSPDGNIALGLSPTPVTSSAAPGDSAGMHSADPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILVKPGEDIASKVVAFSQQGPRTVCVLSAHGAVCNVTLHQPTMAAGSFTPSIKIFLLVIFTLDSLILKSNGKEKTFSGCIISFEHKVSPVLLLFNLMQGRYEIISLSGNFLISDSNGNRNRTGRLSVSLASADGQVLGGITDMLTAASTVQVIVGSFLVDGKKLDSSTQKSGPSSTSPNMLNFSTPAAATGCLSEGASNNSSDDNDGSPLSRAPGLYTNANQPIHNMQMYQLWGSRNQ 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3348786 3357555 + Carg23379-RA Car06g00584 150320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00584 411 ProSiteProfiles PPC domain profile profile. 165 352 IPR005175 -
Car06g00584 411 Pfam Plants and Prokaryotes Conserved (PCC) domain 171 330 IPR005175 -
Car06g00584 411 MobiDBLite consensus disorder prediction 8 86 - -
Car06g00584 411 MobiDBLite consensus disorder prediction 1 162 - -
Car06g00584 411 MobiDBLite consensus disorder prediction 365 393 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00584 Car16g01092 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00584 Car-Chr6:3348786 Car05g00844 Car-Chr5:8331160 4.15E-51 dispersed
Car16g01092 Car-Chr16:9376559 Car06g00584 Car-Chr6:3348786 0 wgd
Car19g00197 Car-Chr19:1854847 Car06g00584 Car-Chr6:3348786 2.82E-76 wgd
Car02g01368 Car-Chr2:9054123 Car06g00584 Car-Chr6:3348786 8.52E-115 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00584 - - cmax:111498434 647.121