Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01086 ATGGCTAGGAAAATACATGACACTTTAAGCCAACAATTATACATGGAACGACCAAGAGTTGTTACGGATATCCGAATTACTGCAGATCATGGTGTGAGTGATGTTTGTGTACAGACGGGTGAGGTATTTTCTCCCCAGTTTGTGAGGGATCGAGCTGCTTTAAGAAGGTTGTCGGATGTGAGTGATGGAGATCAACAACAGCAGCCGCAAAAGAGAACAGGTCTTGCTTTAAATCCGAGCAGCCAACTCGTATATGAGGATCTCAGTGGAATTCTTGGACTCAAGAGGATGAATTCTGAAAGCAGTTCAGAATTATCATCAATGCCCGCGAATGCATATGCAGCTGAAAGGGATAACAAGGTTTATCCTAACAGCACAAGCAAATATCAGTGGGAATATAGTGCTACTGGACAAGCATCTGGTGCATATGCTGATGAAATTAACCGAGTTCAATTTGACCCCTCAACACTGGCCTTGTATGCAATGGAATCACCTCATTCATGTTATCCTTGTGGGGCTGGATTGGGAAATTTCCCTGTCACTGGCAAGATGAAATTTCTCTGTAGTTTTGGAGGTAGAATATTACCAAGGCCTAATGATGGGAAGCTTAGATATGTAGGTGGAGAAACACGCATTATATCCATTAGGAAAAACATCTCTTGTGAACAACTTATCAGAAAGACATACGCTGTCTGTAAGTATGTCCACACTATAAAGTACCAGCTTCCTGGTGAAGATCTCGATTCACTTATCTCTGTTTGTTCTGATGAGGATCTTCATCATATGATTGAGGAATATCATGAGCTGGAAAACGCAGGGAGTTCTCAAAGACTCAGAATAATTCTTGTTTCTACAAATGATTGTTGTGAGAGTCCTACTTCTATTGAAGGAAGGGTGGTTCAACCAATTGATGTTGATTATCAATATGTTGCGGCTGTAAATGGTATGCTAGACCCAAGTCTTCAAAGGAGCTCTAGTGGACAGAGTTTCACAAGTCAGACTAGCCAGGTGGGAACCATCTCAGATCCTAGTCCCAATTTTTGTACTATTTCTTCACATGCTACAGACTTAAAAGATGCCAATTCACCTATACCAAATTTGGCAGGAATGTTTCCTAGACCTGGTGGTCAATTGTTAATACCCATTCAAACCCCACGCAAGTCCTTTAATCAAACACCTTTATTTTCTCCGGTTACAGTAAAGCAAAAAGATTTTAAGAACGTGGATCCAACATACGCAGAAGATGCTAGAAACTTCACTCCATTTGTTGCAGAAAAACGTCCATGTGATACGGTTTATTATGTCGATGCAATAGGCCGTCACAATAACCTTTACCATGGTTCTCCGCTGATGAATTATCATCATGACAAATCTACAGGGGAAACTGATGAGAAATACAAAGTTCATGATGTTCATTTCCCACAAAGCTCCAGCGAAGATTTTGTGCCTGCAACTTACTGGGATCAAAGTGATACACATTCAATCAAGACTCTGCTCAAGGAACGGGCAGTTAATTATGAACAGCTATACTCGGATGCCGAATATTTGATGCAGTTAAGATCTGGAACCACCCACATGAGACAAACAATGATGCATTCACATTCTGAGCCCCTACTAAAGGAACAGGATCAAAAGTTGAAACATGGAGGAGCCTATCCACTGAACTCATTCAATGATAGTGATCAATTATATTCAATGGCAATGTCAAGTTCCTTTCAGGATTTCCAAACGATATGGAAACAGAGAGTTGGCGGGGAATTTCAAGATGCCAAGTATGAGAAACATGGAAAGTTGGCGTCTGGTAGTGAGAATGAAGGATATGAAGAATGCAATTTTGATGAAAAAAAGGTTAATTTCAATGGACGTATTTATGTCCCATCACTTAATGGTGATGAAAAATACAAATACTTGCAACATGTTGACTACCAACAAAATGGCTACCCCCCGCTAGAGGTACAAAGCCTTGGAGGCAGAACTTCTGCAGAACGAGGGTTTGAATTAGAAAAATCTGCAGATGTCGTGGATGGCCCCTCCCTCATTTACCATTTAGAAACAACTGCTCCAAAAGTTTTCGAGGAGAGCCAATATTCTGTCGAGGATCAACGAACCACTTCTGATATAGTAAGGAGCCAACCATTTTCTTGCGCATCTTCTGATCTACTGCCTCTTACAACTCAAGCTTTGTGCGACAGAAAGATCATAAATCAGGAACCAACATGGGATAGTTCTGCTTTAGGTAGAGATGTTTCTCTAGGCGATGAGAACTTCGTAACCTGTAATTACCGTAAGGTTGCAGACCGTAGTAGAAAAAAGAGCAATCTTGATGATTCTCTGTTTATCAAATCATCAAATTCAGATGATTTTCATAGCAATGAGGACGTGGGATTGGCTGTAATAGTTGAAGATGTAACTCATAGTATACCTCCCGACATACCCTTAGCTTCTGGAGTTATCCCACGGGTTGAAAATGAGGCCAGTGATGACTCTCCATCTTCAAGAGGACATGATGCTCATATTCCTAGTACAGAAACTGACCATGAGGATGCAGACAGTATTCTTAATTCTAGGGATGAATCAATGAGCGAGGCAGCAATAGCTGAAATTGAAGCCGGCATCTATGGCCTGCAGATCATAAAGAATGAAGATCTTGAAGAACTGCAAGAATTAGGATCTGGGACGTTTGGCACAGTTTTTCATGGAAAATGGAGGGGAACGGATGTCGCTATTAAGAGAATAAAAAAGAGTTGCTTCTCAGGAAGTTTTTCTGAGCAAGAAAGACTGACTAGAGATTTCTGGAGAGAAGCAAGGATTCTATCGACTCTTCACCATCCGAACGTGTTGGCTTTTTATGGAGTGGTTCCTGATGGACCTGATGGAACGTTGGCAACTGTAACGGAGTATATGGTAAACGGGTCATTAAGGCATGTTCTTTTAAGAAAGGATAGAGTGCTTGATCGTCGGAAAAGGCTTATGATTGCAATGGATGCAGCTTTTGGCATGGAATATTTGCATTTGAAAAACATTGTTCATTTTGATCTGAAGTGTGATAATTTGTTGGTCAACTTGAGGGATCCTGAACGACCCATATGCAAGGTTGGAGATTTTGGGTTGTCGAGAATTAAGCGCAACACACTTGTTTCTGGAGGTGTGCGTGGAACTCTCCCATGGATGGCACCAGAATTGTTAGATAGTGGCAGTTCTAAGGTCTCGGAGAAGGTTGATGTTTTCTCATTCGGTATTGCAATGTGGGAGATTTTGACTGGCGAGGAGCCATATGCCAACATGCATTGTGGTGCCATCATTGGTGGAATTGTAAGTAATACTCTTAGACCACCGATCCCTAAACGCTGCGATACCGAATGGAAAAAGCTAATGGAAGACTGTTGGTCACCTGAACCTGCAGCGAGGCCATCGTTCACCGAGATAACGAATAGACTTCGCAGCATGTCGGTAGCGCTCCAGATCAGAAAGAGGCCAATTGTAGGTAGTAGATGA 3495 41.72 MARKIHDTLSQQLYMERPRVVTDIRITADHGVSDVCVQTGEVFSPQFVRDRAALRRLSDVSDGDQQQQPQKRTGLALNPSSQLVYEDLSGILGLKRMNSESSSELSSMPANAYAAERDNKVYPNSTSKYQWEYSATGQASGAYADEINRVQFDPSTLALYAMESPHSCYPCGAGLGNFPVTGKMKFLCSFGGRILPRPNDGKLRYVGGETRIISIRKNISCEQLIRKTYAVCKYVHTIKYQLPGEDLDSLISVCSDEDLHHMIEEYHELENAGSSQRLRIILVSTNDCCESPTSIEGRVVQPIDVDYQYVAAVNGMLDPSLQRSSSGQSFTSQTSQVGTISDPSPNFCTISSHATDLKDANSPIPNLAGMFPRPGGQLLIPIQTPRKSFNQTPLFSPVTVKQKDFKNVDPTYAEDARNFTPFVAEKRPCDTVYYVDAIGRHNNLYHGSPLMNYHHDKSTGETDEKYKVHDVHFPQSSSEDFVPATYWDQSDTHSIKTLLKERAVNYEQLYSDAEYLMQLRSGTTHMRQTMMHSHSEPLLKEQDQKLKHGGAYPLNSFNDSDQLYSMAMSSSFQDFQTIWKQRVGGEFQDAKYEKHGKLASGSENEGYEECNFDEKKVNFNGRIYVPSLNGDEKYKYLQHVDYQQNGYPPLEVQSLGGRTSAERGFELEKSADVVDGPSLIYHLETTAPKVFEESQYSVEDQRTTSDIVRSQPFSCASSDLLPLTTQALCDRKIINQEPTWDSSALGRDVSLGDENFVTCNYRKVADRSRKKSNLDDSLFIKSSNSDDFHSNEDVGLAVIVEDVTHSIPPDIPLASGVIPRVENEASDDSPSSRGHDAHIPSTETDHEDADSILNSRDESMSEAAIAEIEAGIYGLQIIKNEDLEELQELGSGTFGTVFHGKWRGTDVAIKRIKKSCFSGSFSEQERLTRDFWREARILSTLHHPNVLAFYGVVPDGPDGTLATVTEYMVNGSLRHVLLRKDRVLDRRKRLMIAMDAAFGMEYLHLKNIVHFDLKCDNLLVNLRDPERPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLDSGSSKVSEKVDVFSFGIAMWEILTGEEPYANMHCGAIIGGIVSNTLRPPIPKRCDTEWKKLMEDCWSPEPAARPSFTEITNRLRSMSVALQIRKRPIVGSR 1164
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8151950 8157866 - Carg06273-RA Car06g01086 150822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01086 1164 MobiDBLite consensus disorder prediction 58 77 - -
Car06g01086 1164 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1008 1020 IPR008271 GO:0004672|GO:0006468
Car06g01086 1164 MobiDBLite consensus disorder prediction 811 851 - -
Car06g01086 1164 Pfam Protein tyrosine and serine/threonine kinase 885 1146 IPR001245 GO:0004672|GO:0006468
Car06g01086 1164 ProSiteProfiles Protein kinase domain profile. 883 1153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01086 1164 MobiDBLite consensus disorder prediction 826 851 - -
Car06g01086 1164 MobiDBLite consensus disorder prediction 323 342 - -
Car06g01086 1164 MobiDBLite consensus disorder prediction 60 77 - -
Car06g01086 1164 Pfam PB1 domain 199 284 IPR000270 GO:0005515
Car06g01086 1164 ProSitePatterns Protein kinases ATP-binding region signature. 889 914 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g01086 Car14g01677 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01086 Car-Chr6:8151950 Car18g00264 Car-Chr18:1526836 1.56E-36 dispersed
Car05g00618 Car-Chr5:3666022 Car06g01086 Car-Chr6:8151950 1.42E-24 transposed
Car14g01677 Car-Chr14:13352227 Car06g01086 Car-Chr6:8151950 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88949 PF07714 PK_Tyr_Ser-Thr 7.50E-62 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01086 - - cmax:111473634 2269.2