Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00261 ATGACTATGGAAGTTACTTCTGAATCTCAGCAGCATTCTGTGTACCACCACCAAAGCCAGCCAACTCCAGCAATAGCTATCTCCAACACCATGTCAAATAGCTTCTCAGCTTCCCAGCACTACAATGGTGATTTTCTGTCTCCCCTGTCTGTAATGCCGCTCAAGTCAGATGGGTCTCTTTGTATCATGGACTCAATCAGCAGATCACAAACTCCAGAAACATTGCCAAACATCTCCCCAAAACTTGAGGACTTTCTTGGTGGTGCAACTCATGGAAGAGAGGCGGCCACAGCTCTAAGCTTAGACAGCAGATATTACAATCAAAATCCTGAGGCTAACTCAGAAAGACAACAACGTATTCTTCTTCATTCTGAGCGATACTATTCTGGAATGTTCCATTATCCTGCTGAGGATGTCAACAAGGAGTCTCATATTGCAAGTTATTGCTCTGAAATTCGACAAGATATGGAGCAGCGCATCAATGGCTGCTTTGGAGGAGGGAGGAATTGCCAAGACTTGCAGACACTTAGCTTGTCCATGAGCCCTGGCTCTCAGTCTAGTTGTGTTACTACACCAAGCCAAATTTCTCAATCTGGACAAGCCACCATGGAGACAAAGAAAAGGGCTTTGGCTGATCGAAAGCAGCCGGTCCATCGGAAGTCGATCGGCACGTTCGGACAAAGAACTTCACAGTATAGAGACATAGATGGACCGGTAGATATGAGGCTCATTTGTGGGACAATAGTTGTAAGAAGGAAGGTCAAACCAGGAAAGGGAGACAAGGTGGCTATGATATGGAGGAGAAAGCAGCAAGAGCCTATGATCTTGCAGCTCTCAAGCACACAAGAGGAAGCTGCAGAAGCATATGACATAGCAGCTATCAAGTTCCGTGGCATAAACGCCGTGACAAACTTCGACACTTCAAGGTACGACGTAGAAAGGATCATGGCGAGCAGCAGCCTCCTCTCAGGAGAATTTGCAAGACGAAATAGAGATCACAAACCAACCAACACCATCAAACATGAAGAACCAAAGCAGAACATCTCTCGAACCGACCCCGCGGAGATATACAACAACAATTTAGATTGGAGGACTGTATTCCACGAGAACCTGCTGCTGGATCCAAGCGCAAGCGTGGAATCCATAGACCAAAAGTCCATGGCCTCGAGCGGCAGATACCTGAATAATCTGATCGGAGTCGTCGTCGAAACCGAAGGTTCAAGCAAGTACAAGGCTCAATTCTCCAATGCTTCATCTGTGGTGAGCAGCTTGAGCAGCTCAAGGGAAACTAGTCCTGACAAGCCAAATGGCTCCTCCTCGGTTCCATTTGGAAGCAATGGAAGAAGTATATGGCTCCCATCACCACCGCAAATGAGGCCAGCTCCTACTTCTTTGCCTGTTGAGTCAACTGTTGTTTGGAATGATGCCTAA 1431 46.89 MTMEVTSESQQHSVYHHQSQPTPAIAISNTMSNSFSASQHYNGDFLSPLSVMPLKSDGSLCIMDSISRSQTPETLPNISPKLEDFLGGATHGREAATALSLDSRYYNQNPEANSERQQRILLHSERYYSGMFHYPAEDVNKESHIASYCSEIRQDMEQRINGCFGGGRNCQDLQTLSLSMSPGSQSSCVTTPSQISQSGQATMETKKRALADRKQPVHRKSIGTFGQRTSQYRDIDGPVDMRLICGTIVVRRKVKPGKGDKVAMIWRRKQQEPMILQLSSTQEEAAEAYDIAAIKFRGINAVTNFDTSRYDVERIMASSSLLSGEFARRNRDHKPTNTIKHEEPKQNISRTDPAEIYNNNLDWRTVFHENLLLDPSASVESIDQKSMASSGRYLNNLIGVVVETEGSSKYKAQFSNASSVVSSLSSSRETSPDKPNGSSSVPFGSNGRSIWLPSPPQMRPAPTSLPVESTVVWNDA 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1428446 1431402 + Carg21760-RA Car09g00261 153998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00261 476 MobiDBLite consensus disorder prediction 330 349 - -
Car09g00261 476 ProSiteProfiles AP2/ERF domain profile. 231 306 IPR001471 GO:0003700|GO:0006355
Car09g00261 476 MobiDBLite consensus disorder prediction 330 353 - -
Car09g00261 476 MobiDBLite consensus disorder prediction 425 476 - -
Car09g00261 476 MobiDBLite consensus disorder prediction 425 452 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01376 Car09g00261 CCT
Car05g00104 Car09g00261 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00261 Car-Chr9:1428446 Car05g00741 Car-Chr5:5415780 2.65E-16 dispersed
Car01g01376 Car-Chr1:12078855 Car09g00261 Car-Chr9:1428446 1.24E-46 wgd
Car12g00555 Car-Chr12:3699394 Car09g00261 Car-Chr9:1428446 3.80E-26 wgd
Car03g00809 Car-Chr3:6661442 Car09g00261 Car-Chr9:1428446 3.40E-29 wgd
Car05g00104 Car-Chr5:544015 Car09g00261 Car-Chr9:1428446 2.35E-33 wgd
Car07g00553 Car-Chr7:2818030 Car09g00261 Car-Chr9:1428446 8.95E-28 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00261 K09285 - csv:101212143 348.977