Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00315 ATGGCGGCCGATTTAGCGCGGCTCTCTCTATGGCCTCACCAGAGGCAGTTCTTTCACTCCGCCTCTAAATCTCAGGCTTCTTTGTTTGAGTCTAGGCCTGGATTTCTCCCCATACGGCATCGACCTCAGAGTTTGGTACGGAAACAGTATCCACGTCGTTTTGGAAGATGCTTGGGGCATCGTTTCGTTGTTTCGAATACTCTTGAGGCCGAACTTCGAGCTCAGAACACGGTGCTTCAACAGGAGCGGCGGGATGAGTCTTCTGTTCTTCTTGATGTCTCTGGAATGATGTGTGGTGCATGCGTCTCCCGAGTCAAATCCATTCTCTCGTCCGACGACCGAGTTGACTCTGTGGTGGTTAATATGTTGACTGAGACAGCGGCGATTCGGTTGAAATCGGATGAAGTTGGCGCGGAGGCTGGTTCTGCGGTGAATGTGGCGGAGAGTCTGGCGCGAAGACTGACGGATTGTGGCTTTCCGACGGTTTTGAGGAATTCGGAGGTCGGAGTGGCGGAGAATGTGAGAAAATGGAAGGAGATGGTTGAGAAGAAAAGAAAAATGCTGGTTAAGAGTAGGAATCGAGTGGCTATTGCTTGGACTTTGGTTGCCTTATGCTGTGGCTCACACGCATCGCATATCTTGCACACTTTCGGGATTCACATCCACCACGGACCAGTGATGGAGATACTTCATAACTCGTATGCGAAGGGTTGTTTTGCTTTGGTTGCTCTTTTAGGACCAGGACGAGAACTACTCTTTGACGGTCTGAGGGCATTCAGGAAGGGATCACCTAATATGAACTCTCTTGTGGGTTTTGGAGCTGTTGCTGCATTTATTATCAGTGCGGTCTCACTTCTTAATCCTGAGCTAGACTGGGATGCCTCATTTTTTGATGAGCCGTGCAATTCCTTTTTTAGTGAGCAGGTCATGCTTCTTGGTTTTGTGCTTCTTGGGCGCTCTCTGGAGGAAAGAGCAAGGGTTAAGGCCTCTAGTGATATGAATGAGCTTTTATCGTTGATCTCTTCCCATTCACGACTTGTGATTACTCCATCAGAAGGCAAGTCCTCTACAGATGATGTGCTTTGCTCGGATGCAATGTGCATTCAGGTGTCTACCGATGACATTCGGGTTGGAGACTCGGTTTTAGTTTTGCCTGGAGAGACTATTCCCGTGGATGGAAAGGTTCTTGCGGGAAGAAGTGTTGTAGATGAATCAATGCTTACTGGGGAATCTCTACCTGTATTTAAGGAAGCAGGCCTTATCGTCTCAGCTGGAACTGTGAACTGGGATGGCCCTTTGAGAATTGAAGCGTCTTCTACTGGCTTGAACTCAACAATCTCCAAGATCGTGAGAATGGTTGAGGATGCGCAAGGCCATGAAGCTCCAATACAAAGGCTTGCCGATTCCATAGCTGGGCCATTTGTGTACACTGTATTAACTCTCTCAGCGGCAACATTTGCATTTTGGTACTGCTTTGGTACCCATATCTTTCCTGATGTTTTGATCAATGATATTGCTGGACCAGATGGAGACCCCTTGCTTTTGAGCTTGAAACTTTCAGTTGATGTCTTGGTAGTTTCTTGTCCATGTGCACTTGGACTAGCCACTCCCACAGCAATTCTAGTTGGCACCTCCCTTGGGGCTCGACGAGGACTTCTAATAAGAGGAGGAGATGTATTGGAACGCCTGGCAGGCATAGATTGTGTTGCTTTGGACAAGACAGGAACTCTTACTGAAGGAAAGCCTACAGTTTCTTCTGTGGTTTCGTTTGTTTATGGAGAAGCAGAAATACTTCAAGTTGCTGCTGCGGTGGAGAAAACTGCTTCACATCCCATTGCAAGAGCTATCATAGATAAAGCAGAATCTTTGAATTTGACCATTCCAGGCACAACAGGGCAGTTGGTAGAACCTGGCTTCGGATCTTTTGCCAATGTAAATGGGCGACTAGTTGCAGTCGGTTCATTAGAATGGGTTAGTGATCGATTTGAGCAAAAAGCAAGTACCTCTGATCTTAAGAATCTCGAGCATTCTGTGTTTCAGTCATTAGAGTGGATATCATCTTCAAATAATTCAAAAACAGTTGTTTACGTTGGGCGCGAAGGAGAGGGCATCATTGGTGCTATTGTAATATCTGATCGGTTGCGCTATGATGCTGAATCCACTGTTAATAGGCTCCAGAAGAAGGGAATCAGAACGGTCCTCTTATCTGGAGACAGGGAAGAGGCAGTTGCAAGTGTAGCCAAGTCAGTTGGAATAGAAAAGGAATTTGTTCACTCATCTTTGACTCCTCAAAACAAATCTGACCTTATTTCCACTCTGAAAACTGCTGGACATCGAGTTGCTATGGTTGGTGATGGCATAAATGATGCACCATCTTTGGCTTCTTCCGATGTTGGGATCGCTCTGCAGCTTGAAGCACATGAAAATGCTGCTTCGAATGCCGCATCCATTTTACTTCTTGGAAATAGAATATCTCAGCTTGTTGACGCAATGGAACTTGCACAAGCAACAATGTCTAAGGTGTACCAAAATTTGTCGTGGGCAATAGCTTACAATGCCGTTGCCATTCCAATTGCTGCTGGGGTTCTGCTCCCAGGATTTGACTTTGCAATGACTCCTTCCCTTTCAGGTGGTCTTATGGCTTTAAGTTCAATATTCGTCGTCACCAACTCATTACTTCTGCAGATCCATGCCCCCAAAGAACCTCAAAAATCTACCTGA 2721 46.34 MAADLARLSLWPHQRQFFHSASKSQASLFESRPGFLPIRHRPQSLVRKQYPRRFGRCLGHRFVVSNTLEAELRAQNTVLQQERRDESSVLLDVSGMMCGACVSRVKSILSSDDRVDSVVVNMLTETAAIRLKSDEVGAEAGSAVNVAESLARRLTDCGFPTVLRNSEVGVAENVRKWKEMVEKKRKMLVKSRNRVAIAWTLVALCCGSHASHILHTFGIHIHHGPVMEILHNSYAKGCFALVALLGPGRELLFDGLRAFRKGSPNMNSLVGFGAVAAFIISAVSLLNPELDWDASFFDEPCNSFFSEQVMLLGFVLLGRSLEERARVKASSDMNELLSLISSHSRLVITPSEGKSSTDDVLCSDAMCIQVSTDDIRVGDSVLVLPGETIPVDGKVLAGRSVVDESMLTGESLPVFKEAGLIVSAGTVNWDGPLRIEASSTGLNSTISKIVRMVEDAQGHEAPIQRLADSIAGPFVYTVLTLSAATFAFWYCFGTHIFPDVLINDIAGPDGDPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGARRGLLIRGGDVLERLAGIDCVALDKTGTLTEGKPTVSSVVSFVYGEAEILQVAAAVEKTASHPIARAIIDKAESLNLTIPGTTGQLVEPGFGSFANVNGRLVAVGSLEWVSDRFEQKASTSDLKNLEHSVFQSLEWISSSNNSKTVVYVGREGEGIIGAIVISDRLRYDAESTVNRLQKKGIRTVLLSGDREEAVASVAKSVGIEKEFVHSSLTPQNKSDLISTLKTAGHRVAMVGDGINDAPSLASSDVGIALQLEAHENAASNAASILLLGNRISQLVDAMELAQATMSKVYQNLSWAIAYNAVAIPIAAGVLLPGFDFAMTPSLSGGLMALSSIFVVTNSLLLQIHAPKEPQKST 906
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1740732 1750364 + Carg02794-RA Car09g00315 154052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00315 906 Coils Coil 65 85 - -
Car09g00315 906 Pfam haloacid dehalogenase-like hydrolase 566 796 - -
Car09g00315 906 Pfam E1-E2 ATPase 363 550 - -
Car09g00315 906 ProSiteProfiles Heavy-metal-associated domain profile. 88 163 IPR006121 GO:0046872
Car09g00315 906 Pfam Heavy-metal-associated domain 91 136 IPR006121 GO:0046872
Car09g00315 906 ProSitePatterns E1-E2 ATPases phosphorylation site. 572 578 IPR018303 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00660 Car09g00315 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00315 Car-Chr9:1740732 Car15g00097 Car-Chr15:568053 8.06E-90 dispersed
Car11g01187 Car-Chr11:9631332 Car09g00315 Car-Chr9:1740732 5.38E-08 dispersed
Car09g00315 Car-Chr9:1740732 Car16g00223 Car-Chr16:1245878 3.58E-124 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00315 K17686 - csv:101214637 1542.32