Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g01082 ATGGGCTGCGCGCAAGCGAAGCATTCCATGAATTCACCCAATGGGCGAATTCAGACCCTGAAATTGGAAAATGGGTATGTTGGGACTGGGGATTTTAAGGCTCATCGGAGGCCAGCGGCGCAGAGGAGATTTGTGAACAGGGAGGCGTCTGAAGCAGTGAACCCCCACGGTGGTGATGGCGGCGGCGGTAATGGCGGATTAGGTTTGGAGAAGAGTGAGGTGGTGGTGGATGGATGGCCCAAATGGCTTACTAGCAATATTCCTAAGCATGTGTTGGCTGGCTTGGTTCCCAAGAGTGTGGAGGCCTATGACAAGCTTGATAAGGTAGGCCAAGGAAGTTACAGCAATGTGTACAAAGCTCGAGATAGGGAAAGTGGAAAGATTGTTGCCCTTAAGAAGGTCCGTTTTGATACAACAGAGCCTGAGAGTGTGAAGTTCATGGCAAGAGAAATTATGATATTACTGAAATTGGATCACCCCAACATTGTCAAACTTGAAGGATTAGCCACCTCAAGAATGCAGTTCAGTCTTTATCTTGTTTTCGAGTTTATGCAGACTGATTTGGCCCGGGTTATTTCTCGCCCCGGAGTACGGCTTACGGAGCCTCAGGTCAAATGTTATATGCATCAGCTACTCTCTGGTCTGAAGCATTGCCACGATAAGGGGATACTACACCGTGATATCAAAGGATCGAACCTGTATCGAGCTCCGGAGCTATTGTTAGGTTCTACAGATTATGGAGTCGGCATTGATCTATGGAGTGCTGGATGCCTCTTGGCCGAAATGTTCACGGGAAGGCCGATTCTGCCCGGTCGAACAGAGGTTGAACAACTCCACAAAATTTTCAAGGTATGTGGAACACCATCTGAGGAATATTGGAGAAAACTCAAGCTATCACCGAGTTTCAAGCCTCCGCAGTTGTATCGACCTAGTCTCCGAGAATCGTTTAAGCATCTGCCGTCCTCGTCTTTAGGCCTCTTAAGCACTCTACTTGCTTTGGAGCCTTCATATCGCGGTTCTGCGTCGTTAGCTCTCGAGAATGAATTCTTTTACACAAGCCCATTGGCATGTGATGTTTCGGGTCTTCCTGTTATCCATAGTGAGCCCGATGAACCGAATCAAACGAATCAGCCGAAGTGCAAGAATTCTAAAGTGACAAGGCGTTCTTCTACACACCAAGGGCGTCGGAGGAAAGATTTAGCTGCTGAAAAACCAAAAGAAGAGTCGAACATTCGCAAACAGCTTTCACAGCAAATGGTCGATGCTGACGAACAAAGCGAAGATCGAGGGAGTACTACAACGAGCACCTCCTCGAGTGCTAACATGGGAGGAGGGCAAAAGGGGAGTACTACGACGAGCACCTCCTCAAGCGTTAACAGGGGAGGATCAGGAAAGGGGAGCTCTAACTTCTTGCCATCTCCAACCACATCTAATAAGAAACCGTCACGAACGGAAGGCCATCTTGAGGCTACCAACAACCTCAATTTGCCCCCATTACCAAAGTCGAGAAGATACTCAACCTTTAACATCGAAGACCGTGATATGCATATCTCTGGTCGGATTCGGAGGTCGGTCTCAACCAGAGATTTCAGGAATTTGGCGCGAAAAGAGCATTTGAAATTATATGCTGTTGATGATTAG 1641 47.84 MGCAQAKHSMNSPNGRIQTLKLENGYVGTGDFKAHRRPAAQRRFVNREASEAVNPHGGDGGGGNGGLGLEKSEVVVDGWPKWLTSNIPKHVLAGLVPKSVEAYDKLDKVGQGSYSNVYKARDRESGKIVALKKVRFDTTEPESVKFMAREIMILLKLDHPNIVKLEGLATSRMQFSLYLVFEFMQTDLARVISRPGVRLTEPQVKCYMHQLLSGLKHCHDKGILHRDIKGSNLYRAPELLLGSTDYGVGIDLWSAGCLLAEMFTGRPILPGRTEVEQLHKIFKVCGTPSEEYWRKLKLSPSFKPPQLYRPSLRESFKHLPSSSLGLLSTLLALEPSYRGSASLALENEFFYTSPLACDVSGLPVIHSEPDEPNQTNQPKCKNSKVTRRSSTHQGRRRKDLAAEKPKEESNIRKQLSQQMVDADEQSEDRGSTTTSTSSSANMGGGQKGSTTTSTSSSVNRGGSGKGSSNFLPSPTTSNKKPSRTEGHLEATNNLNLPPLPKSRRYSTFNIEDRDMHISGRIRRSVSTRDFRNLARKEHLKLYAVDD 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10127893 10132934 - Carg27056-RA Car09g01082 154819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g01082 546 ProSiteProfiles Protein kinase domain profile. 103 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car09g01082 546 MobiDBLite consensus disorder prediction 366 502 - -
Car09g01082 546 MobiDBLite consensus disorder prediction 45 67 - -
Car09g01082 546 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524
Car09g01082 546 MobiDBLite consensus disorder prediction 395 411 - -
Car09g01082 546 MobiDBLite consensus disorder prediction 429 502 - -
Car09g01082 546 Pfam Protein kinase domain 103 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car09g01082 546 MobiDBLite consensus disorder prediction 369 384 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00780 Car09g01082 CCT
Car01g00780 Car09g01082 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g01082 Car-Chr9:10127893 Car14g01474 Car-Chr14:12256152 1.92E-128 dispersed
Car09g01082 Car-Chr9:10127893 Car16g00361 Car-Chr16:2244419 7.14E-128 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89105 PF00069 Pkinase 1.20E-33 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g01082 K08819 - csv:101209601 804.283