Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00167 ATGGGTTTCTTCATTTGTGTCTTCTCCATGGTTGTAGCAGCAACCCTTTTAAGCCACTGCTCTGTTTCTCTCACTGAAGATGGTTTAACATTGTTGGAAATCAAAAGTGGTTTAAATGACACCAAGAACGCTCTCAGTAACTGGAGCCCTTCAGATGAATCTCCCTGCAAATGGACGGGTATCTCTTGCCATCCCCAGGACTCTCGTGTCAGCTCAATTAATCTACCATACATGCAACTAGGAGGGATTATATCTCCCAGCATTGGTAAACTTAGCAGATTGCAAAGACTGGCTCTCCACCAAAACGGCTTACATGGGTATATCCCCAATGAACTTGCTAATTGTTCTGAACTTAGAGCACTGTACCTGAGGGCTAATTATCTTGAAGGTGGCATTCCATCAAATATTGGAAACCTTTCTTACCTTGCCATACTGAAACCTTTTACCTCTGCCACTCAGTTTTTATCACTGGTATTTAACTGTAGGGATCTATCAAGCAATTCCTTTAAGGGAAGCATACCATCATCAATTGGTCGTCTCACACACTTGCGCAATCTGAATTTATCTACCAACTCTTTCTTTGGAGAAATCCCAGATATTGGAGTTCTTAGCACCTTTGGGAATGACTCGAAGAGGTTTCCACACCCTTATAAGGAACGCTCTGTTCCTCTCTCCAACCGACGTGGGATCTCACAATCCACCCCCTTGGGGACCCAGCGCCCTCGCTGGTACACCGCCCGGTTCCTTGACAATCAAGGTCTTTGTGGCCGGCAAGTGAACAAGCCCTGCCGGACCTCACTCGGATTTCCTGCTGTCTTACCACATGCTGAAATTCCTGCAAAACGATCCTCTCATTACTTGAAGGGACTGTTGATTGGTGCAATATCGACAGCGGGGTTCGTGTTGGTCGTACTTATTGTGTTCATGTGGACTCGTTTGCTGTCAAAGAAAGAACGAACTGCAAAGAGTTACATGGAAGTTAAGAAGCAAAGGAACTACGAACCAAGTGAGAAGCTTATTACATTCCATGGCAATCTTCCATATCCAACATGTGAGATCATAGAGAAGCTGGAGGGCCTTAATGAAACAAATGTTATTGGCTCAGGCGGGTTAGGCACTGTGTATCGGATGGTCATGAATGATCGTGGAGCATTTGCTGTAAAGAAAATTGATAGGACTCAGGATGGTTCAGAGCAAGTAGTTGAAAGAGAATTGGAGATATTGGGAAGCATTAAACACATAAACATAGTGAAATTGCGTGGCTATTGCAGGCTTCCTTCTTCAAAGCTTCTGATATATGATTATCTGACAGAGGGTAGCTTGGATGATTTCTTGCACGAACATGGAGCAGGAAAGTGTTTGGATTGGAGTGCTCGGTTAAACATAGCGCTGGGCACCGCTCGAGGACTGGCATACTTGCACCATGATTGCTGTCCAAAGATTGTGCACTGCAACATAAAATCCAGCAACATTCTTCTTGACGAGAACTTAGAGGCGCACGTAGCTGACTTTGGTCTTGCAAAGCTTTCAGTTGATGGGGATTCCCATATCACAACAGTTGTTGCTGGCACATTTGGTTATCTGGCTCCAGAATACTTGCAAAGTGGGATAGGAACTGAGAACTCTGATGTTTATAGCTTTGGAGTGCTGTTGCTGGAGCTTGTAACAGGGAAGAGACCAAGTGATGCATTTTTCTCAAAGAGGGGCCTAAATGTTGTTGGTTGGTTGAACACCCTGAGAGGAGAAGACCAATTGGAGAACATAGTGGATAATAGGTGCAAGAATGCAGATGTGGAAACATTAGAAGCGATTCTCGAAATAGCGGCGAGGTGCACTAATGGCAACCCGGCTATGCGGCCTACAATGAACCAAGTACTGCACCTGCTAGAGCGAGAGGTTATGTCGCCCTGCCCGAGCGATTACTCCGAGTCTCACTCGGATTATTCATGA 1950 45.18 MGFFICVFSMVVAATLLSHCSVSLTEDGLTLLEIKSGLNDTKNALSNWSPSDESPCKWTGISCHPQDSRVSSINLPYMQLGGIISPSIGKLSRLQRLALHQNGLHGYIPNELANCSELRALYLRANYLEGGIPSNIGNLSYLAILKPFTSATQFLSLVFNCRDLSSNSFKGSIPSSIGRLTHLRNLNLSTNSFFGEIPDIGVLSTFGNDSKRFPHPYKERSVPLSNRRGISQSTPLGTQRPRWYTARFLDNQGLCGRQVNKPCRTSLGFPAVLPHAEIPAKRSSHYLKGLLIGAISTAGFVLVVLIVFMWTRLLSKKERTAKSYMEVKKQRNYEPSEKLITFHGNLPYPTCEIIEKLEGLNETNVIGSGGLGTVYRMVMNDRGAFAVKKIDRTQDGSEQVVERELEILGSIKHINIVKLRGYCRLPSSKLLIYDYLTEGSLDDFLHEHGAGKCLDWSARLNIALGTARGLAYLHHDCCPKIVHCNIKSSNILLDENLEAHVADFGLAKLSVDGDSHITTVVAGTFGYLAPEYLQSGIGTENSDVYSFGVLLLELVTGKRPSDAFFSKRGLNVVGWLNTLRGEDQLENIVDNRCKNADVETLEAILEIAARCTNGNPAMRPTMNQVLHLLEREVMSPCPSDYSESHSDYS 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 808712 812628 + Carg10399-RA Car10g00167 155069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00167 649 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Car10g00167 649 ProSiteProfiles Protein kinase domain profile. 360 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00167 649 Pfam Protein kinase domain 362 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00167 Car18g00121 CCT
Car10g00167 Car11g00135 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00167 Car-Chr10:808712 Car07g00150 Car-Chr7:889423 1.47E-93 dispersed
Car10g00167 Car-Chr10:808712 Car11g00135 Car-Chr11:764403 0 wgd
Car10g00167 Car-Chr10:808712 Car18g00121 Car-Chr18:643503 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89117 PF00069 Pkinase 7.60E-46 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00167 - - csv:101217728 1033.09