Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00135 ATGGGTCTTTCCATCTGGGCCTTCTCCGCGATTTTAGCAGCAACCCTTTTCAGCCACTGCTCCTTTTCGCTCACTGAAGATGGTTTGACATTGTTGGAAATCAAAACTACTTTGAATGACACTAAGAACGTCCTCGCTAATTGGAGCCCTTCAGATGAATCTCCCTGCAAATGGACTGGCATTTCTTGCCATCCCCAGGACTCTCGTGTTAGCTCAATTAATCTACCGTTCATGCAACTAGCAGGGACTATATCTCCCAGCATTGGTAAACTTAGTAGATTGCAGAGACTGGCTCTCCACCAGAACGGATTACATGGATATATTCCCAATGAACTTGCCAATTGTTCTGAACTTAGAGCCATCTACCTGAGGGCTAACTATCTCCAAGGTGGGATTCCATCAAATATTGGAAACCTTTCTTACCTCACCATACTTGATTTATCAAGCAATTCCCTTAAGGGAAGTATACCATCATCAATTGGTCGTCTCACAAACTTACGCAATCTGAATTTGTCTACCAACTTTTTCTTTGGAGAAATCCCAGATATTGGAGTTCTAAGCACCTTTGGGAATAACTCGTTCTTTGGTAATCAAGATCTTTGTGGTCGGCAAGTGAACAAGCCGTGTCGGACCTCACTGGGGTTTCCTGCTGTTTTACCACATGCTGGAAGTGATCAAGCTGCAGTTCCTGTGAAACGATCCTCTCATTACATCAAAGGACTGTTAATTGGTGCAATATCGACAGCAGGGTTCGTGTTGGTCATACTTCTTGTACTCATGTGGACTCGTTTGGTATCCAAGAAAGAAAGAACTGCAAAGAGTTACTTGGAAGTTAAGAAGCAAAATACTCGCGAATCAAGTGCAAAGCTCATTACATTCCATGGTGATCTACCGTACCCGACGTGTGAGATCATAGAAAAGCTGGAGGCCCTTAAAGAAACAAATATTGTTGGCTCAGGAGGGCTCGGCACCGTGTATCGGATGGTCATGAATGATCGTGAAGCGTTTGCTGTAAAGAAAATTGATAGGAGTCAAGATGGTTCAGATCAAGTAATTGAAAGAGAATTGGAGATCTTGGGAAGCATTAAACACATAAATTTAGTGACACTGCGTGGTTATTGCAGGCTCCCTTCTTCAAAGCTTCTTATATATGACTATCTCGCAGCTGGTAGCTTGGATGATTTCTTACATGAATATGGACCCGAAAGGTCTTTGGATTGGAGTGCTCGGTTAAACATAGCGCTCGGCTCCGCTCGAGGACTGGCATACTTGCACCATGATTGCTGTCCAAAGATTGTGCACTGCAACATAAAATCCAGCAACATTCTTCTCGACAAGAACTTAGAGGCGCATGTATCCGACTTTGGTCTCGCAAAGCTTTCGGTTGATGGGGATTCCCATGTCACAACTGTTGTTGCTGGCACATTTGGTTATTTGTCTCCAGAATACTTGCAAAGTGGCATAGGAACTGAGAAGTCTGATGTTTATAGCTTTGGAGTTCTGTTGCTGGAGCTTGTAACAGGGAAGAGACCCAGTGATCCATTTTTCTCAAAAAGGGGCTTAAATGTTGTTGGTTGGTTGAACACACTCCGGGGAGAAGACCAATTGGAGAACATAGTGGATAATAGGTGCAAGAATGCAGATGTCGAAACTGTAGAAGTGATTCTTGAAATAGCAGCAAGGTGCACCAATGGCAACCCGGCTATGCGGCCTACAATGAACCAAGTTCTGCAGCTGCTAGAGCGAGAGGTAATGTCGCCCTACCCGAGCGATTACTCCGAGTCTCACTCGGATTATTCGTGA 1803 44.26 MGLSIWAFSAILAATLFSHCSFSLTEDGLTLLEIKTTLNDTKNVLANWSPSDESPCKWTGISCHPQDSRVSSINLPFMQLAGTISPSIGKLSRLQRLALHQNGLHGYIPNELANCSELRAIYLRANYLQGGIPSNIGNLSYLTILDLSSNSLKGSIPSSIGRLTNLRNLNLSTNFFFGEIPDIGVLSTFGNNSFFGNQDLCGRQVNKPCRTSLGFPAVLPHAGSDQAAVPVKRSSHYIKGLLIGAISTAGFVLVILLVLMWTRLVSKKERTAKSYLEVKKQNTRESSAKLITFHGDLPYPTCEIIEKLEALKETNIVGSGGLGTVYRMVMNDREAFAVKKIDRSQDGSDQVIERELEILGSIKHINLVTLRGYCRLPSSKLLIYDYLAAGSLDDFLHEYGPERSLDWSARLNIALGSARGLAYLHHDCCPKIVHCNIKSSNILLDKNLEAHVSDFGLAKLSVDGDSHVTTVVAGTFGYLSPEYLQSGIGTEKSDVYSFGVLLLELVTGKRPSDPFFSKRGLNVVGWLNTLRGEDQLENIVDNRCKNADVETVEVILEIAARCTNGNPAMRPTMNQVLQLLEREVMSPYPSDYSESHSDYS 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 764403 767924 + Carg18172-RA Car11g00135 156088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00135 600 Pfam Protein kinase domain 313 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g00135 600 Gene3D Transferase(Phosphotransferase) domain 1 387 590 - -
Car11g00135 600 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Car11g00135 600 Gene3D Phosphorylase Kinase; domain 1 271 386 - -
Car11g00135 600 Gene3D Ribonuclease Inhibitor 25 211 IPR032675 -
Car11g00135 600 SUPERFAMILY Protein kinase-like (PK-like) 290 581 IPR011009 -
Car11g00135 600 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 35 592 - -
Car11g00135 600 PANTHER REPEAT FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 35 592 - -
Car11g00135 600 Pfam Leucine rich repeat 118 174 IPR001611 GO:0005515
Car11g00135 600 SUPERFAMILY L domain-like 25 186 - -
Car11g00135 600 ProSiteProfiles Protein kinase domain profile. 311 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g00135 Car18g00121 CCT
Car10g00167 Car11g00135 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00551 Car-Chr4:3104515 Car11g00135 Car-Chr11:764403 7.54E-170 dispersed
Car04g01115 Car-Chr4:6427648 Car11g00135 Car-Chr11:764403 2.05E-32 dispersed
Car09g00604 Car-Chr9:3429789 Car11g00135 Car-Chr11:764403 1.55E-94 dispersed
Car09g00658 Car-Chr9:3862978 Car11g00135 Car-Chr11:764403 0 dispersed
Car11g00135 Car-Chr11:764403 Car07g00150 Car-Chr7:889423 4.32E-105 dispersed
Car10g00167 Car-Chr10:808712 Car11g00135 Car-Chr11:764403 0 wgd
Car11g00135 Car-Chr11:764403 Car18g00121 Car-Chr18:643503 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89159 PF00069 Pkinase 1.60E-43 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00135 - - csv:101217728 1088.94