Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00147 ATGGAGGGGGGTGATGACCTCCACCGCTACCACCACCACCACCACAACCACCACCACCATCACCGCCCTAACTTCCCGTTTCAATTACTCGAAAAGAAAGACGACGACGACGCCACCGCCGCCTCTTGCTCAACTTCCCCTTACCCTTCTCTCGCCATCTCCACCGACCCTACTACAACCGCCGCCGCTGCTGCTGTCGAGCCCTCCAAGAAGCCACCACCGAAAAGAACCTCCACCAAAGACCGCCACACTAAAGTGGATGGCCGTGGGCGGCGCATCCGAATGCCAGCCCTATGTGCGGCGAGGGTATTCCAGCTGACACGCGAACTGGGTCACAAGTCCGACGGAGAAACCATCGAGTGGCTACTCCAACAGGCGGAACCCTCCGTGATCGCCGCCACGGGAACCGGAACAATCCCGGCGAACTTCACATCCCTCAACATCTCATTACGTAGCTCTGGCTCCACCATGTCCGTCCCTTCACAGCTCCGTTCATCGTCCTATTACAATCCAAATTTCTCCCTCCACCCACCACGCCGCACCCTTTTCCCCGGATTTGGCCTCTCATCGGAAACTTCCTCCACCGCCCTCCTCAATTTCCAGTCCACTAACACCGGCAACTCTCTACTCCAAGCCAAACCCGAACTCCGAGACACCACCACTTCATTAGACCTCTCCGACGCGGCGGAGGACATCAGCATAGGACGGAAGAGACGGCCATCGTCGGAGCAGGAGTTCAGTACAGGCGCGATTCCGGCGAGCGGAGGTCAGGTACAGGCGAATTTATGGATGCTTGCGAATACAAATAACCAAGGGATGGGGGTTGACCCCATATGGACTTTTCCGTCGGTGAATAACAGCGGTTTGTATAGAGGGACGATGTCGAGTGGGTTGCATTTCATGAACTTTCCGGGTCCGGTCACGTTGGTTCCGGGTCAGCAACTCGGGTCGAGCGCCAGCGGTGGGAGTAATAGTTCTAGTGAGGCCCACTTCAATATACTTGCTGGCCTGAATCCTTATCGGTCGCTGTCAAGCAGCGGCGTAATGGAAGCGCAGGGAAGTGGATCGCAGTCTCATCACGGCGGCGGCGGAGATGACCGCCACGACACAACCAGTCACCACTCGTAA 1128 57.27 MEGGDDLHRYHHHHHNHHHHHRPNFPFQLLEKKDDDDATAASCSTSPYPSLAISTDPTTTAAAAAVEPSKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGSTMSVPSQLRSSSYYNPNFSLHPPRRTLFPGFGLSSETSSTALLNFQSTNTGNSLLQAKPELRDTTTSLDLSDAAEDISIGRKRRPSSEQEFSTGAIPASGGQVQANLWMLANTNNQGMGVDPIWTFPSVNNSGLYRGTMSSGLHFMNFPGPVTLVPGQQLGSSASGGSNSSSEAHFNILAGLNPYRSLSSSGVMEAQGSGSQSHHGGGGDDRHDTTSHHS 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 831723 832850 - Carg18184-RA Car11g00147 156100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00147 375 MobiDBLite consensus disorder prediction 227 253 - -
Car11g00147 375 MobiDBLite consensus disorder prediction 36 90 - -
Car11g00147 375 MobiDBLite consensus disorder prediction 40 62 - -
Car11g00147 375 Pfam TCP family transcription factor 77 245 IPR017887 -
Car11g00147 375 ProSiteProfiles TCP domain profile. 79 133 IPR017887 -
Car11g00147 375 MobiDBLite consensus disorder prediction 361 375 - -
Car11g00147 375 MobiDBLite consensus disorder prediction 73 90 - -
Car11g00147 375 MobiDBLite consensus disorder prediction 344 359 - -
Car11g00147 375 MobiDBLite consensus disorder prediction 344 375 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g00147 Car13g00957 CCT
Car11g00147 Car13g00957 ECH
Car10g00176 Car11g00147 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00147 Car-Chr11:831723 Car11g01298 Car-Chr11:10753075 3.74E-39 dispersed
Car10g00176 Car-Chr10:839601 Car11g00147 Car-Chr11:831723 0 wgd
Car11g00147 Car-Chr11:831723 Car13g00957 Car-Chr13:9659431 7.04E-76 wgd
Car11g00147 Car-Chr11:831723 Car18g01068 Car-Chr18:10862749 5.06E-80 wgd
Car11g00147 Car-Chr11:831723 Car04g01690 Car-Chr4:9711586 1.48E-80 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4231 PF03634 TCP 1.40E-38 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00147 - - cmax:111471252 610.142