Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00861 ATGAAGACAGGTCACAAGTACCAAATAGACATGGGTGACATGAAAGTTCTGCCCGGTCCACGACCTCGTACTACCAAGAGGCCGTTATGGATTATTATCTTGGTTTCTATGGTCTGTGTGTTCCTAATATGTGCTTATATCTATCCACCCAGTGGCACAGGGGCCTGTTACATATTTTCTGATAAGGGATGCAGGGTTATTACTGACTGGCTCCCACCTTCACCTGCAAGGGAACTAAGTGATGCTGAGATTGCATCACGTATTGTTATTAGAGAAATTTTGAACACACCATTTGTTCCATTGAAAACTCCTAAAATTGCATTCTTGTTCTTGACTCCTGGTTCCCTGCCTTTTGAGAAGCTATGGGATAATTTTTTCAAGGGCCATGAAGAGAAATTCTCTATTTATATCCATGCATCTAAGGAAAAGCCAGTGCACGTCAGCCGATACTTCGCTGGTCGAGAAACTCATAGCGATGAGGTTATATGGGGTAAAATTTCGATGGTCGACGCAGAGAGACGATTGTTAGCAAACGCCCTTCACGATCCCGATAATCAGCACTTTGTTTTACTTTCTGATAGTTGTGTACCGTTGCATAATTTCGATTATATCTATCAGTATTTGATCAATACCAATCTCAGTTACGTGGACTGCTTTAAGGATCCTGGTCCTCATGGAAATGGGAGGTATTCAAAGCATATGCTACCTGAAATTGAAATGAAAGACTTCAGAAAGGGTGCTCAGTGGTTCTCGATGAAGCGACAACACGCTTTGATCGTCGTGGCTGATAATCTTTACTACTCGAAGTTTCGAGATTATTGTAAGCCAGGTTTGGAGGGACACAATTGCATTGCAGATGAACATTATTTGCCCACCTTTTTCCATATGACGGATCCTGAAGGGATTGCAAACTGGTCAATTACTCACGTTGATTGGTCGGAAAGAAAGTGGCATCCGAAGTCGTATGGGGTTCAAGATGTTACCTACGAACTTCTACAAAATATCACGTCGATCGATGTTAGTGTGCACGTTACGAGCGACGAAAGGAAGGAAGTGCAAAGATGGCCATGCTTGTGGAACGGTGTACAGAGGCCATGTTACTTATTTGCAAGGAAGTTCTATCCGGAGGCTCTAGATAACCTTATGAACCTCTTCTCCAACTACTCATCGCTATCAGCCTGA 1182 42.98 MKTGHKYQIDMGDMKVLPGPRPRTTKRPLWIIILVSMVCVFLICAYIYPPSGTGACYIFSDKGCRVITDWLPPSPARELSDAEIASRIVIREILNTPFVPLKTPKIAFLFLTPGSLPFEKLWDNFFKGHEEKFSIYIHASKEKPVHVSRYFAGRETHSDEVIWGKISMVDAERRLLANALHDPDNQHFVLLSDSCVPLHNFDYIYQYLINTNLSYVDCFKDPGPHGNGRYSKHMLPEIEMKDFRKGAQWFSMKRQHALIVVADNLYYSKFRDYCKPGLEGHNCIADEHYLPTFFHMTDPEGIANWSITHVDWSERKWHPKSYGVQDVTYELLQNITSIDVSVHVTSDERKEVQRWPCLWNGVQRPCYLFARKFYPEALDNLMNLFSNYSSLSA 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8390922 8395230 + Carg24201-RA Car12g00861 158477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00861 393 Pfam Core-2/I-Branching enzyme 106 335 IPR003406 GO:0016020|GO:0016757
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00661 Car12g00861 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00349 Car-Chr11:1921713 Car12g00861 Car-Chr12:8390922 0 dispersed
Car12g00269 Car-Chr12:1783918 Car12g00861 Car-Chr12:8390922 6.25E-162 dispersed
Car12g00861 Car-Chr12:8390922 Car14g01132 Car-Chr14:9982274 1.98E-80 dispersed
Car20g00546 Car-Chr20:3016775 Car12g00861 Car-Chr12:8390922 2.17E-56 dispersed
Car10g00362 Car-Chr10:1779178 Car12g00861 Car-Chr12:8390922 2.13E-65 wgd
Car12g00861 Car-Chr12:8390922 Car05g00661 Car-Chr5:4116509 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00861 - - csv:101219592 783.867