Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00587 ATGGAGTCTGGGCGGTTCTTGTTTAATCCGCCGCCTTGCGGTGGCAACATGCTTTACCTTGGCGGAGCCGGTGGCGATCCTGTTCTGCGAGGAGGAAGAACAATGATGAGTATGACTATGCATGAGAGTCCAAAGGGGAGGCCATTTTTTCGATCACCGGACGATCTTTACGATGATGAATATTACGACGAGTTCTACCCTGAGAAGAAGCGTCGTCTCACCCATGATCAGGTTTGTTATATTTGCCTTTACTGCCCCATTTTGCCTGCTTCTGCTGCTGCACTCTCTGTGGGACAAAAATTTAGAAGTTGCGTAAAATTGTTGAAGGTTCAAATGTTGGAGAAGAGCTTTGATGAAGACAACAAACTGGAGCCAGAGAGGAAGTCCCAACTGGCCAAGAAGTTGGGGCTGCAACCAAGGCAGGTGGCTGTGTGGTTCCAGAATCGTCGTGCTCGATGGAAGACAAAGCAGCTCGAAAGGGACTATGATGTTCTTAAAGCTTCATATGATTTGCTTCTGTCTAACTATGACTCAGTTATCAAAGAGAATGCAGATCTTAAATCTCAGGTGGCTTCCTTAACTGAGAAATGTCTGGCTAAAGAGCTGGATGGAGGAGGAGAAGCACCAATTCCATGTGTGACATCAGAGCCTCTTCTAGCAGACATTGGCCATGTCTCCGCCCCACACTCCAGCAGAAAGGCTGAAGATCGTCTCAGTTCAGGGAGCGATGACAGTACGGTGATCGACGATAATTGTCGACAACTCACTGATTGCTGTGATTCTTACTTCCCCAGCAACGAGTATCTGCAATGTGCACCTCTGCCTAATGGGTTGCAAATGGAACATGATGATAGCAATAACAATAGCAACTACTTGTTCTCAGACATGTTTGCAGTAACAGGCCAACAAAATCAGGAGGGACTGGGAGGGCCTCCTGCTTGGTGGACATGGCCTTAG 957 47.65 MESGRFLFNPPPCGGNMLYLGGAGGDPVLRGGRTMMSMTMHESPKGRPFFRSPDDLYDDEYYDEFYPEKKRRLTHDQVCYICLYCPILPASAAALSVGQKFRSCVKLLKVQMLEKSFDEDNKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKASYDLLLSNYDSVIKENADLKSQVASLTEKCLAKELDGGGEAPIPCVTSEPLLADIGHVSAPHSSRKAEDRLSSGSDDSTVIDDNCRQLTDCCDSYFPSNEYLQCAPLPNGLQMEHDDSNNNSNYLFSDMFAVTGQQNQEGLGGPPAWWTWP 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3198557 3201441 - Carg09732-RA Car14g00587 160489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00587 318 Coils Coil 176 196 - -
Car14g00587 318 MobiDBLite consensus disorder prediction 226 245 - -
Car14g00587 318 Pfam Homeobox associated leucine zipper 156 196 IPR003106 GO:0006355|GO:0043565
Car14g00587 318 ProSiteProfiles 'Homeobox' domain profile. 96 156 IPR001356 GO:0003677
Car14g00587 318 MobiDBLite consensus disorder prediction 228 243 - -
Car14g00587 318 Pfam Homeodomain 101 154 IPR001356 GO:0003677
Car14g00587 318 ProSitePatterns 'Homeobox' domain signature. 131 154 IPR017970 GO:0000981|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car14g00587 Car15g00313 CCT
Car04g02619 Car14g00587 CCT
Car11g01382 Car14g00587 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00587 Car-Chr14:3198557 Car13g00767 Car-Chr13:8605745 1.39E-35 dispersed
Car11g01382 Car-Chr11:11285730 Car14g00587 Car-Chr14:3198557 1.17E-156 wgd
Car14g00587 Car-Chr14:3198557 Car15g00313 Car-Chr15:1688606 5.11E-71 wgd
Car14g00587 Car-Chr14:3198557 Car04g02619 Car-Chr4:20454193 1.16E-72 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4652 PF00046 Homeodomain 6.50E-16 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00587 K09338 - csv:101212142 450.284