Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00917 ATGGAGGGAGCGGAAATGGAGCTTGAGCGACGCACCAAGTTTCTAAATGGGCTTATTTTGAAGAAGAAGGCGGGGGAGCATCAAGAGCACCGCGATCGTCTCAATGTTCGCGTTAGAGCCTCCGATATGCCGTTTCCTCTCCAGAATCGCGCTTTTAGTTGCGCTCGTGAACTTCTTGATTCCATGCCTGGGAAGCTCGATAGCAAACGCCTCGCTCTTGCCCTCAAAAAGGAATTTGATTCGTCCTATGGTCCAGCATGGCATTGCATCGTGGGAACTAGCTTTGGGTCGTATGTAACACATTCTCTGGGTGGGTTCTTGTATTTTTCAATCGACAAAGTTTACATCCTTCTCTTCAAAACGGCAGTGGAGCCTCTGTCTCGTGGGAAGTCGTTGAAAGATTGA 405 48.89 MEGAEMELERRTKFLNGLILKKKAGEHQEHRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGKSLKD 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 6009018 6011339 + Carg23722-RA Car15g00917 162754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00917 134 Pfam Dynein light chain type 1 36 121 IPR001372 GO:0007017|GO:0030286
Car15g00917 134 PANTHER DYNEIN LIGHT CHAIN 1 127 - -
Car15g00917 134 SMART Dynein_light_2 31 121 IPR001372 GO:0007017|GO:0030286
Car15g00917 134 PANTHER DYNEIN LIGHT CHAIN 1 127 IPR001372 GO:0007017|GO:0030286
Car15g00917 134 SUPERFAMILY DLC 29 121 IPR037177 GO:0007017|GO:0030286
Car15g00917 134 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 24 122 IPR037177 GO:0007017|GO:0030286
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g00094 Car15g00917 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00757 Car-Chr13:8555635 Car15g00917 Car-Chr15:6009018 7.91E-35 dispersed
Car15g00917 Car-Chr15:6009018 Car18g00129 Car-Chr18:701935 1.47E-32 dispersed
Car15g00917 Car-Chr15:6009018 Car04g02056 Car-Chr4:16707102 2.02E-83 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00917 K10418 - csv:101219841 257.299