Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g01082 ATGAGGGGGATTTCCTTTCATTTTCAGGGGAAGGGGGACTTGGAAATTTCAGCCGCGTTATCTTCTTCTCCGATTTGCTCTGGTTTTGCAGAAAAGTGGGTTAAGAAAGGGGAAGAACACCAAGAACTCGAAGAACAACAAGAAGGGTTTTCTTATTTTCTTTTACCCAACAACGAACCCACTTCCGTTCTTCATATGAGAAGCCCCAGTCCTCCCACATCGGTTTCCACTCTCTCTTCTTCCTTTGGCGGTGGCGGTGGCGGTGGCGGTGGTTGTGTTCCTTCACTTCCTCCGGAGACCCCTTCTGTTGAGCCGCTCGCCGGAGCTGGTGTTGGGAACGCCATTTTTTCTAGTGGATTGGAGGATTTGGAGATATGGGGAGTAAAAACCCCTTTGATTTGGATGGCAATGCCGGTATCGGAATTGTCGAACAGGGTTCTGAATTCGGCGGCGGAGCTGCCATTTGAGCGCCCTGATGAGAAGCCCCAGAGTTTGAATGCTGCTCAGGTTTTGTTGAACCAGCACCAGCCCCCTCAGAATCCTAGCTTCTTTGTGCCATTGATAACAGCAGCTACAGCCTCAGCTGAAGAGGCACATTCGAGCGGAGCATCGACGCGAACCCGACGGGTCGATACCGATACCGACAATGAGATTTTGATTGAGGAATCATCAGTGGCAGTGTTGCAGCAGCAGCAGCAGCAGCAGCTTGGTTATGCACCTGGTTTGCAGTGTCTTCCTCAGCAGAAGGCAATGTCTCCGAAGCCGAAAGTTGTAGGGCTTGGCGACGAAATGATTTATAACAATCCCCCACAGCAACAGCAACATGCTTTGCTCGACCAGCTCTACAAGGCGGCGGAGCTGGTCGGGACTGGGAACTTCTCACACGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCACCCATTGGAAAGCCCCTTCAAAGGGCTGCTTTCTACTTCAAGGAGGCTCTTCAATTGCTCCTCCTTATGAACAACCCGGTTAATCCTCCTCCACCTCGCTGCCCGACACCGTTTGATGTGATCTTTAAGATGGGTGCTTACAAGGTGTTTTGCGAAATCTCCCCACTTGTTCAGTTTGTGAATTTCACCTGCAATCAGGCACTGCTCGAGGCTCTCGACGACGTTGGTCGAATTCACATTGTAGATTTTGATATTGGTTTTGGAGCACAATGGGCTTCTTTTATGCAGGAACTGTCCTTGAGGAACCAGGGTGCATCACTCAAAATCACTGCTTTTGCCTCTCCCTCGACTCATCATCCGATCGAACTCGGGCTTATGCGCGAAAATCTCACTCAATTTGCTAATGACATTGGGATAAGTTTCGAGTTCGAAATGATCAACTTCGATTCCTTGAACCAGAACTCCTTTTCGTTGCCATTTTCTCGAGCAAACGGAAAAACGAGCTATTGCAGCTCAGTAATCACTTCCTCTAAGTTCGACATCGATATCAACCAGCATTACTTCTCCATCCTCTCCCCGTTTCATCAAAACACTCTCATCACAATAACTCGTGTTTCACTCGAACCGAATTGA 1557 49.26 MRGISFHFQGKGDLEISAALSSSPICSGFAEKWVKKGEEHQELEEQQEGFSYFLLPNNEPTSVLHMRSPSPPTSVSTLSSSFGGGGGGGGGCVPSLPPETPSVEPLAGAGVGNAIFSSGLEDLEIWGVKTPLIWMAMPVSELSNRVLNSAAELPFERPDEKPQSLNAAQVLLNQHQPPQNPSFFVPLITAATASAEEAHSSGASTRTRRVDTDTDNEILIEESSVAVLQQQQQQQLGYAPGLQCLPQQKAMSPKPKVVGLGDEMIYNNPPQQQQHALLDQLYKAAELVGTGNFSHAQGILARLNHQLSPIGKPLQRAAFYFKEALQLLLLMNNPVNPPPPRCPTPFDVIFKMGAYKVFCEISPLVQFVNFTCNQALLEALDDVGRIHIVDFDIGFGAQWASFMQELSLRNQGASLKITAFASPSTHHPIELGLMRENLTQFANDIGISFEFEMINFDSLNQNSFSLPFSRANGKTSYCSSVITSSKFDIDINQHYFSILSPFHQNTLITITRVSLEPN 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 9296213 9298035 - Carg26182-RA Car16g01082 164234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g01082 518 MobiDBLite consensus disorder prediction 65 83 - -
Car16g01082 518 Pfam GRAS domain family 278 461 IPR005202 -
Car16g01082 518 ProSiteProfiles GRAS family profile. 268 518 IPR005202 -
Car16g01082 518 MobiDBLite consensus disorder prediction 65 100 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00693 Car16g01082 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g01082 Car-Chr16:9296213 Car17g00447 Car-Chr17:3024157 1.37E-69 dispersed
Car16g01079 Car-Chr16:9265873 Car16g01082 Car-Chr16:9296213 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4995 PF03514 GRAS 2.80E-49 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g01082 - - csv:101218630 478.789