Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g01033 ATGGAGAAGGCTTTATCCAAGGTGAGCAGCTTGAAGGTTGGGAGCTTGTGGGTTTCAAAGAAAGCCAAGGAGGAAATCGCTAACATCACCGACGATTTCCATACTTTTTCAAGCACTGTTGAAGAGAAGGCAAAGTGGATTTTCAACAAGCTAAAAGGAAAGCCATTGAAGAGCTTACCAGATTTACTTCGCGAGTACAACTTACCACCCGGCCTCTTTCCTCAGAACATAACCTGCTACGAATTTGATGAATCCAAGTCGAAGCTGATCGTCTACTTACCATCGGTTTGCGAGATAAGCTTCAAGGATTCGTCTGTAATCCGATATGCGACACGGGTTAAAGGAACTCTTCAGAGAGGGAAGCTCACAGGCATTGAAGGAATGAAGACAAAGGTCCTAGTGTGGGTGAAAGTGACAAGCGTGACGGTTGAGGGCTACAAATCTGATAAGGTATGGTTCACTGCAGGAGTGAAGAAGTCGAGATCGAAAGATGCCTATGATAAGCCCCGTGATGGCGTTAGGGTAGAAGCATTCTGA 537 45.62 MEKALSKVSSLKVGSLWVSKKAKEEIANITDDFHTFSSTVEEKAKWIFNKLKGKPLKSLPDLLREYNLPPGLFPQNITCYEFDESKSKLIVYLPSVCEISFKDSSVIRYATRVKGTLQRGKLTGIEGMKTKVLVWVKVTSVTVEGYKSDKVWFTAGVKKSRSKDAYDKPRDGVRVEAF 178
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 10672726 10675150 + Carg17297-RA Car18g01033 166735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g01033 178 Pfam Protein of unknown function, DUF538 61 166 IPR007493 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g01724 Car18g01033 CCT
Car04g01724 Car18g01033 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car18g01033 Car-Chr18:10672726 Car08g00241 Car-Chr8:1518265 2.51E-14 dispersed
Car03g00291 Car-Chr3:4021695 Car18g01033 Car-Chr18:10672726 2.58E-59 transposed
Car01g00439 Car-Chr1:2510984 Car18g01033 Car-Chr18:10672726 1.05E-10 wgd
Car18g01033 Car-Chr18:10672726 Car04g01724 Car-Chr4:9880848 6.28E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g01033 - - csv:101214933 310.457