Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g0383 | ATGCTCTCTGGGTTTTCACAGGAACCGGCCGGAATGTACTCCATTCCGGCGCTGCCGATGGACGGGGGCGGCGGTAAGTTTCAGGGTTCTTTAGATGGAACGAATCTTCCCGGCGACGCTTGTTTGGTTCTCACGTCGGATCCGAAGCCGCGCCTCCGCTGGACGGCGGAGCTCCATGAACGATTCGTTGACGCCGTCACTCAGCTCGGTGGCCCCGACAAGGCAACGCCAAAAACAATTATGAGAACAATGGGAGTAAAAGGTCTCACCCTTTATCACTTAAAATCACACCTCCAGAAATATCGGCTCGGGAAGCAATCGTTCAAGGAATCAACCGAGAACTCAAAGGATGCTTCTTGCATTGCAGAAAGTCAAGAAACAAGTTCCTCGTCGTCGCCATCGTCGAGAATAATGACACAGGATCTGAATGATGGTTTCCAAGTCACGGAGGCTTTACGAGTGCAAATGGAGGTTCAAAGAAGGCTGCACGAGCAGCTGGAGGTGCAGCGTCATCTTCAACTTCGCATTGAAGCACAAGGCAAATACTTGCAGTCGATACTCGAGCGGGCTTGTCAAGCATTGAGTGATCAGGCTGCAGCGTCTGCCGGACTCGAAGCTGCCAGAGAAGAGCTCTCTGAACTTGCAATCAAAGTCTCCAATGATTCTAAAGAGATGGCACCATTGGAGACTCAAAAAGTGCTTCCCTTTTCAGAACTTGCTGCTGCTCTAGAAAATCGAAAGGCTCCTACCGTTATGCCTCGAATAGGCAATTGCTCGATGGATAGCTGCCTGACATCAGCTGGTAGCCCAGTTTCCCCAATCAGAGTAGGATCAACTGCCACCGCAATGAAGAGACCGAGACCAGTTTTTAGTCATGGAGATTCGATGGCTCTCGAGGGCAATGCCCGACACGATGTCGAATGGATGATGAGTAATATTGGATGA | 945 | 50.69 | MLSGFSQEPAGMYSIPALPMDGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQETSSSSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEAQGKYLQSILERACQALSDQAAASAGLEAAREELSELAIKVSNDSKEMAPLETQKVLPFSELAAALENRKAPTVMPRIGNCSMDSCLTSAGSPVSPIRVGSTATAMKRPRPVFSHGDSMALEGNARHDVEWMMSNIG | 314 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 3124482 | 3128214 | - | CePI673135_05g003830.1 | Cec05g0383 | 202186 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g0383 | 314 | Gene3D | - | 48 | 107 | - | - | |
Cec05g0383 | 314 | SUPERFAMILY | Homeodomain-like | 49 | 106 | IPR009057 | - | |
Cec05g0383 | 314 | Pfam | MYB-CC type transfactor, LHEQLE motif | 147 | 192 | IPR025756 | - | |
Cec05g0383 | 314 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 49 | 104 | IPR006447 | GO:0003677(InterPro) | |
Cec05g0383 | 314 | MobiDBLite | consensus disorder prediction | 112 | 138 | - | - | |
Cec05g0383 | 314 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 28 | 278 | IPR046955 | GO:0003700(InterPro) | |
Cec05g0383 | 314 | FunFam | Myb family transcription factor | 48 | 106 | - | - | |
Cec05g0383 | 314 | Coils | Coil | 204 | 224 | - | - | |
Cec05g0383 | 314 | MobiDBLite | consensus disorder prediction | 113 | 138 | - | - | |
Cec05g0383 | 314 | Pfam | Myb-like DNA-binding domain | 51 | 102 | IPR001005 | - | |
Cec05g0383 | 314 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 46 | 106 | IPR017930 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g1815 | Cec-Chr4:36909216 | Cec05g0383 | Cec-Chr5:3124482 | 3.60E-45 | dispersed | |
Cec05g0383 | Cec-Chr5:3124482 | Cec09g2389 | Cec-Chr9:40654358 | 3.00E-39 | dispersed | |
Cec05g0383 | Cec-Chr5:3124482 | Cec02g1969 | Cec-Chr2:37533770 | 7.80E-40 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29496 | PF00249 | Myb_DNA-binding | 1.90E-07 | CL0123 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g0383 | - | - | - | 0.0 |