Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0383 ATGCTCTCTGGGTTTTCACAGGAACCGGCCGGAATGTACTCCATTCCGGCGCTGCCGATGGACGGGGGCGGCGGTAAGTTTCAGGGTTCTTTAGATGGAACGAATCTTCCCGGCGACGCTTGTTTGGTTCTCACGTCGGATCCGAAGCCGCGCCTCCGCTGGACGGCGGAGCTCCATGAACGATTCGTTGACGCCGTCACTCAGCTCGGTGGCCCCGACAAGGCAACGCCAAAAACAATTATGAGAACAATGGGAGTAAAAGGTCTCACCCTTTATCACTTAAAATCACACCTCCAGAAATATCGGCTCGGGAAGCAATCGTTCAAGGAATCAACCGAGAACTCAAAGGATGCTTCTTGCATTGCAGAAAGTCAAGAAACAAGTTCCTCGTCGTCGCCATCGTCGAGAATAATGACACAGGATCTGAATGATGGTTTCCAAGTCACGGAGGCTTTACGAGTGCAAATGGAGGTTCAAAGAAGGCTGCACGAGCAGCTGGAGGTGCAGCGTCATCTTCAACTTCGCATTGAAGCACAAGGCAAATACTTGCAGTCGATACTCGAGCGGGCTTGTCAAGCATTGAGTGATCAGGCTGCAGCGTCTGCCGGACTCGAAGCTGCCAGAGAAGAGCTCTCTGAACTTGCAATCAAAGTCTCCAATGATTCTAAAGAGATGGCACCATTGGAGACTCAAAAAGTGCTTCCCTTTTCAGAACTTGCTGCTGCTCTAGAAAATCGAAAGGCTCCTACCGTTATGCCTCGAATAGGCAATTGCTCGATGGATAGCTGCCTGACATCAGCTGGTAGCCCAGTTTCCCCAATCAGAGTAGGATCAACTGCCACCGCAATGAAGAGACCGAGACCAGTTTTTAGTCATGGAGATTCGATGGCTCTCGAGGGCAATGCCCGACACGATGTCGAATGGATGATGAGTAATATTGGATGA 945 50.69 MLSGFSQEPAGMYSIPALPMDGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQETSSSSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEAQGKYLQSILERACQALSDQAAASAGLEAAREELSELAIKVSNDSKEMAPLETQKVLPFSELAAALENRKAPTVMPRIGNCSMDSCLTSAGSPVSPIRVGSTATAMKRPRPVFSHGDSMALEGNARHDVEWMMSNIG 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3124482 3128214 - CePI673135_05g003830.1 Cec05g0383 202186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0383 314 Gene3D - 48 107 - -
Cec05g0383 314 SUPERFAMILY Homeodomain-like 49 106 IPR009057 -
Cec05g0383 314 Pfam MYB-CC type transfactor, LHEQLE motif 147 192 IPR025756 -
Cec05g0383 314 NCBIfam myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677(InterPro)
Cec05g0383 314 MobiDBLite consensus disorder prediction 112 138 - -
Cec05g0383 314 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 28 278 IPR046955 GO:0003700(InterPro)
Cec05g0383 314 FunFam Myb family transcription factor 48 106 - -
Cec05g0383 314 Coils Coil 204 224 - -
Cec05g0383 314 MobiDBLite consensus disorder prediction 113 138 - -
Cec05g0383 314 Pfam Myb-like DNA-binding domain 51 102 IPR001005 -
Cec05g0383 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 106 IPR017930 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1815 Cec-Chr4:36909216 Cec05g0383 Cec-Chr5:3124482 3.60E-45 dispersed
Cec05g0383 Cec-Chr5:3124482 Cec09g2389 Cec-Chr9:40654358 3.00E-39 dispersed
Cec05g0383 Cec-Chr5:3124482 Cec02g1969 Cec-Chr2:37533770 7.80E-40 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29496 PF00249 Myb_DNA-binding 1.90E-07 CL0123 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0383 - - - 0.0