Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1057 ATGAGGATTATGATAAAAGGTGGTGTGTGGAAGAACACCGAAGATGAGATCCTTAAAGCCGCGGTTATGAAATATGGCAAAAACCAATGGGCTCGAATTTCGTCGCTTCTTGTCCGGAAATCTGCTAAGCAGTGCAAGGCTCGCTGGTATGAGTGGCTTGACCCCTCCATTAAAAAGACTGAGTGGACAAGAGAGGAGGATGAGAAACTACTCCATCTTGCTAAGCTCATGCCAACCCAGTGGAGAACTATTGCACCAATTGTCGGGCGTACTCCATCCCAGTGTCTCGAGCGGTATGAGAAGCTTCTTGATGCTGCTTGTGTTAAGGATGACAATTACGAACCAGGAGATGACCCAAGAAAATTGCGCCCTGGAGAAATTGACCCAAACCCAGAGTCAAAGCCTGCGCGTCCTGACCCTGTTGACATGGATGAAGATGAAAAGGAAATGCTTTCTGAAGCACGAGCAAGGTTAGCAAATACTAGGGGAAAGAAGGCAAAAAGGAAAGCCAGAGAGAAACAACTTGAAGAGGCCAGGAGGCTTGCTTCGCTACAAAAAAGGAGAGAGCTAAAAGCTGCAGGGATTGATACTCGACAACGGAAGAGAAAGAGAAAAGGAATAGATTACAATGCTGAAATTCCTTTTGAGAAAAGGCCTCCTCCAGGATTTTTTGATGTTAGTGAGGAAGATAGACCAGTGGAACAGCCCAAATTTCCAACAACAATTGAAGAACTAGAAGGCAAAAGAAGGGTTGATGTAGAGGCTCAATTAAGAAAACAAGATATTGCAAAGAATAAAATTGCTCAGAGACAAGATGCTCCATCAGCTGTACTGCAAGCAAATAAGCTGAATGACCCAGAAATGGTGAGGAAAAGATCTAAACTTATGCTGCCTGCACCTCAAATTTCAGACCATGAATTGGAGGAAATTGCAAAAATGGGATATGCAAGTGATCTTCTAGCTGGTAATGAAGAGCTTGCAGATGGAAGTGGTGCTACACGAGCTCTGCTTGCAAATTATGCACAGACACCACGACAAGGAATGACACCTTTTCGAACTCCCCAAAGGACGCCGGCTGGTAAGGGTGATGCTATAATGATGGAGGCAGAAAACCTTGCTAGGCTGAGAGAATCTCAGACTCCATTATTGGGAGGAGAGAATCCGGAGCTGCATCCTTCAGACTTTTCCGGGGTCACCCCAAGGAAAAAGGAGATTCAAACACCAAATCCTATGTTAACACCCTCAGCAACTCCTGGTGGTGTTGGTCTCACTCCTCGAAGTGGCATGACAACAGCTAGGGATGCTTACTCATTTGGAATGACTCCAAAAGGAACGCCTATTAGAGATGAGTTACGTATCAATGAAGATATGGACGCACATGATAGTGCAAAACTTGAGTCTCAAAGACAAGCTGATTTGAGAAGGAATCTTAGCCTAGGATTAGGCAATCTTCCACAGCCTAAGAATGAGTACCAGGTAGTTATGCAACCAATTCCAGAAGACAAAGAAGAACCTGAGGAGATGATTGAGGAGGACATGTCTGACAGGATTGCTAGAGAACGAGCTGAGGAAGAAGCAAGGCGGCAGGCTTTGCTTAGGAAAAGATCAAAAGTACTACAAAGGGAGCTTCCTCGGCCTCCTACTGCTTCTTTGGAACTTATTAGAAATTCTTTGATGAGAGCTGATGGAGACAAGAGCTCATTTGTTCCACCTACCCCTATTGAGCAGGCTGATGAAATGATAAGAAAGGAACTTCTTGCTTTGTTAGAGCATGATAATGCAAAGTACCCAATTGATGAAAAGGCTAGCAAGGAGAGAAAGAAAGGTTCAAAGCGCACTGGAAATGGACCTACTGCAGTCATCCCAACAATAGATGATTTTGAAGAAACTGTGATGGAAGAGCCAAGAAGAGACATTTCATATGTGAAAAATTACAGTCTTTTTGCTAAGTTGGCCGAGAAGTACAACATTGGTGATTTAATCCTCAATGTTGGGGCTGGTGGTGGTGCCTCTGTCCCAGCTGGTGGCGCTGCTGCTGCACCTGCTCCTCCACCTAAAGAGAAAAAGGAAGAACCTAAGGAAGAGAGTGACGATGATATGGGATTTAGTTTGTTCGGTTAG 2121 44.55 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDDNYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARRLASLQKRRELKAAGIDTRQRKRKRKGIDYNAEIPFEKRPPPGFFDVSEEDRPVEQPKFPTTIEELEGKRRVDVEAQLRKQDIAKNKIAQRQDAPSAVLQANKLNDPEMVRKRSKLMLPAPQISDHELEEIAKMGYASDLLAGNEELADGSGATRALLANYAQTPRQGMTPFRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPRKKEIQTPNPMLTPSATPGGVGLTPRSGMTTARDAYSFGMTPKGTPIRDELRINEDMDAHDSAKLESQRQADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEEPEEMIEEDMSDRIARERAEEEARRQALLRKRSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLALLEHDNAKYPIDEKASKERKKGSKRTGNGPTAVIPTIDDFEETVMEEPRRDISYVKNYSLFAKLAEKYNIGDLILNVGAGGGASVPAGGAAAAPAPPPKEKKEEPKEESDDDMGFSLFG 706
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 17423665 17431887 - CePI673135_06g010570.1 Cec06g1057 205794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1057 706 Coils Coil 167 187 - -
Cec06g1057 706 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Cec06g1057 706 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 638 IPR047242 GO:0000398(PANTHER)|GO:0000398(InterPro)|GO:0000974(PANTHER)|GO:0000974(InterPro)|GO:0005681(PANTHER)
Cec06g1057 706 MobiDBLite consensus disorder prediction 157 176 - -
Cec06g1057 706 MobiDBLite consensus disorder prediction 400 414 - -
Cec06g1057 706 Gene3D - 59 114 - -
Cec06g1057 706 CDD SANT 10 53 IPR001005 -
Cec06g1057 706 FunFam CDC5 cell division cycle 5-like 5 59 - -
Cec06g1057 706 MobiDBLite consensus disorder prediction 597 621 - -
Cec06g1057 706 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Cec06g1057 706 Gene3D - 5 58 - -
Cec06g1057 706 CDD SANT_CDC5_II 55 106 IPR047240 -
Cec06g1057 706 MobiDBLite consensus disorder prediction 382 423 - -
Cec06g1057 706 MobiDBLite consensus disorder prediction 684 700 - -
Cec06g1057 706 Coils Coil 514 534 - -
Cec06g1057 706 MobiDBLite consensus disorder prediction 110 150 - -
Cec06g1057 706 FunFam CDC5 cell division cycle 5-like 60 120 - -
Cec06g1057 706 MobiDBLite consensus disorder prediction 672 706 - -
Cec06g1057 706 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Cec06g1057 706 MobiDBLite consensus disorder prediction 597 612 - -
Cec06g1057 706 Pfam 60s Acidic ribosomal protein 646 705 - -
Cec06g1057 706 MobiDBLite consensus disorder prediction 213 234 - -
Cec06g1057 706 Pfam pre-mRNA splicing factor component 407 636 IPR021786 -
Cec06g1057 706 SMART sant 58 105 IPR001005 -
Cec06g1057 706 SMART sant 6 55 IPR001005 -
Cec06g1057 706 Pfam Myb-like DNA-binding domain 10 70 - -
Cec06g1057 706 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Cec06g1057 706 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1057 Cec-Chr6:17423665 Cec10g0725 Cec-Chr10:10516886 1.30E-10 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29782 PF11831 Myb_Cef 1.20E-50 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1057 K12860 - csv:101205030 1193.33