Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g0867 | ATGGAGTTGGAGGATCACGAAGAAGAAGACATGGAAATAGTAGAACCACCATCAAATTACATCAACAAAATCCACCCACTTTCTTGGCACACAAAAAACCCATCTCCGGTCCACTCGAACCCCATCATATACAACTACAAAGAATGCTTAAAAAATCACGCCGTCGCCGTCGGCGGTCACGCCTTCGACGGGTGCGGCGAGTTCATGCCCAGCGGACCGCACGGCTCTCTCGACGCCCTCAAATGTGCTGCCTGCCACTGCCACCGCAACTTCCACCGCAAAGACATCACTGACGACGGCGGCGTCAACGGAGAATCAGGGTCGCAGTACATTTCGTACTGGCGTGCTCCGAGGATGCTGGCGCTGCCTTCTCCGTCGTCGGCACGGAAGCGAGTGCGGACGAAGTTCACGGAGGAGCAGAAGGAGAAGATGGTGGAGATGGCGGCGAAAATGGAGTGGCGGATTCAGAAGAAGGATGAAGCGGCGGTGATGGAATTCTGCAATGAAATCGGCGTGAAGCGGCGAGTGTTGAAGGTTTGGATGCATAACAACAAGAACACGTTTTGTAGTAAGGAATCCAAACAAAACTAA | 591 | 52.96 | MELEDHEEEDMEIVEPPSNYINKIHPLSWHTKNPSPVHSNPIIYNYKECLKNHAVAVGGHAFDGCGEFMPSGPHGSLDALKCAACHCHRNFHRKDITDDGGVNGESGSQYISYWRAPRMLALPSPSSARKRVRTKFTEEQKEKMVEMAAKMEWRIQKKDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFCSKESKQN | 196 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 18775665 | 18776255 | + | CePI673135_10g008670.1 | Cec10g0867 | 213782 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g0867 | 196 | SUPERFAMILY | Homeodomain-like | 123 | 187 | IPR009057 | - | |
Cec10g0867 | 196 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 40 | 187 | - | GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0050793(PANTHER) | |
Cec10g0867 | 196 | FunFam | Zinc-finger homeodomain protein 2 | 119 | 190 | - | - | |
Cec10g0867 | 196 | NCBIfam | ZF-HD homeobox protein Cys/His-rich dimerization domain | 45 | 95 | IPR006456 | - | |
Cec10g0867 | 196 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 46 | 95 | IPR006456 | - | |
Cec10g0867 | 196 | Pfam | ZF-HD protein dimerisation region | 45 | 96 | IPR006456 | - | |
Cec10g0867 | 196 | NCBIfam | homeobox domain, ZF-HD class | 129 | 186 | IPR006455 | - | |
Cec10g0867 | 196 | Gene3D | - | 121 | 191 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec08g1547 | Cec-Chr8:27126900 | Cec10g0867 | Cec-Chr10:18775665 | 1.20E-37 | dispersed | |
Cec10g0867 | Cec-Chr10:18775665 | Cec11g0010 | Cec-Chr11:170889 | 8.60E-37 | dispersed | |
Cec10g0867 | Cec-Chr10:18775665 | Cec04g1544 | Cec-Chr4:34928549 | 1.70E-40 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30363 | PF04770 | ZF-HD_dimer | 1.20E-27 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g0867 | - | - | - | 0.0 |