Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01223 ATGGATCCAACATCCTACAAAATTTTCCTCCAACTTGTGCAGTACTCTCCCTATGGAAACAACATTGACGTCAATAATCCCACCTCTTCTTCAGTACTATTCTTCCTCCCCTTCCTCTTCCTCTTCTTCCTACTTTCACTCAAATTCTTGTCCACCAAAAACCCCAAAACCAACAACTTACCACCATCACCACCACAACTCCCAATAATTGGCAACCTTCACCAACTCGGCAGCCTCCCACACCGCTCAGTGGCATCTCTTGCAGAGAAATATGGGCCTCTCATGCTCCTCAAACTAGGTCAAACCCCAACTCTTGTTGTCTCATCAACAAAACTAGCTAAAGAAGTAATGAAGTCCCATGATACCATCTGCTCAAACAGAGTCCAAAACACAGCTGCAAAGTCCATATTCTATGGATGTCATGATGTGGCCTTTGCTTCCTATGGAGAACATTGGAGACAGGCAAGAAAATTATGTGTTCTGGAGCTATTGAGTTCCAAAAGAGTTGAGTCTTTCCAACATGTTAGAGATGAAGAAGTTGCAAGGCTAGTGAAAAAGATTGAAAATTGTAATAAGGATAACCCATTATTGTGTGTGATCAATCTCAATGAGCTTTTGTTGTCAACTTCAAACAATATTGTGGGGAGATGTGTTTTGGGAGAGAAGTTTGTGGAAGAACATGATGGAAACTTCGGAGAAGTTACAAGAAAGGCTATGGTGCTTTTGGCTGAGTTTTGTGTTGGGGATGTTTTTCCTTGGCTTGGATGGATTGATGTTTTGAGAGGATTTCATGGTCAACTCAAAGCTTGTGTTGAAACATTGGATAAGCTTGTTGAGAAAGCGATTGAAGAACGTAGGGAAAAATTGAAGAGTGGTGATGATCTACCTTCTGAGAAGGATTTTGTAGGGGTTATGCTCAAATTGCAACAACAAGACGCACTTTATTATCATTTCACTATGGAAAATTTCAAAGCAATTTTACTGGATATGTTTGTAGCTGGAACAGACACAACAGCAGTAAGTTTGGAATGGTCAATGGCAGAACTGATGAGAAACCCAACAGCCATGAAAAAAGTTCAAGAAGAGGTCAGAACAATAGTTGGTAAAAAGACAAAGATTGAAACAAAAGACATTAAAAAAATGGAGTACATGAAATGTGTTATAAAAGAAACTTTAAGACTTCACCCACCAGGTCCTCTTTTGTTGCCAAGAGAAACAACGGGAAGTTTCAACCTTGAAGGCTACCAAATTCCACCAAAAACAAGGGTTTGGATCAATGCTTGGAAAATTCAAAGAGACCCCAAAATCTGGGAAAGCCCAAACCAGTTCGTTCCAGAGAGATTCATGGAGGAAAAGAAATCAGTTGATTTCAAAGGTCATGACTTTGAGTTCATTCCATTTGGGAGTGGAAGAAGGAAGTGCGTTGGATTGTCATTTGCTATTGCTTCTTTTGAACATGTATTGGCCAATCTTCTTTATTGGTTTGATTGGAACCTTCCATCTGGGGGGATGTTGGATATGACTGAACAACATGGTCTCGCTATTTCCAAGAAATTTTCACTCCATCTTATTCCAATTCCATATAGTGTGTAA 1593 39.86 MDPTSYKIFLQLVQYSPYGNNIDVNNPTSSSVLFFLPFLFLFFLLSLKFLSTKNPKTNNLPPSPPQLPIIGNLHQLGSLPHRSVASLAEKYGPLMLLKLGQTPTLVVSSTKLAKEVMKSHDTICSNRVQNTAAKSIFYGCHDVAFASYGEHWRQARKLCVLELLSSKRVESFQHVRDEEVARLVKKIENCNKDNPLLCVINLNELLLSTSNNIVGRCVLGEKFVEEHDGNFGEVTRKAMVLLAEFCVGDVFPWLGWIDVLRGFHGQLKACVETLDKLVEKAIEERREKLKSGDDLPSEKDFVGVMLKLQQQDALYYHFTMENFKAILLDMFVAGTDTTAVSLEWSMAELMRNPTAMKKVQEEVRTIVGKKTKIETKDIKKMEYMKCVIKETLRLHPPGPLLLPRETTGSFNLEGYQIPPKTRVWINAWKIQRDPKIWESPNQFVPERFMEEKKSVDFKGHDFEFIPFGSGRRKCVGLSFAIASFEHVLANLLYWFDWNLPSGGMLDMTEQHGLAISKKFSLHLIPIPYSV* 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 16949768 16951562 + Chy12G218230.1 Chy12g01223 239004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01223 530 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01223 530 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01223 530 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01223 530 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01223 530 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 31 527 - -
Chy12g01223 530 SUPERFAMILY Cytochrome P450 61 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01223 530 Gene3D Cytochrome P450 46 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01223 530 Pfam Cytochrome P450 61 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01223 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Chy12g01223 530 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01223 530 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01223 530 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01223 530 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01223 530 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01223 530 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01223 530 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01223 530 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01223 530 PANTHER CYTOCHROME P450 71B11-RELATED 31 527 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g02614 Chy12g01223 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy12g01219 Chy-Chr12:16919661 Chy12g01223 Chy-Chr12:16949768 7.73E-156 dispersed
Chy12g01221 Chy-Chr12:16937742 Chy12g01223 Chy-Chr12:16949768 0 dispersed
Chy12g01223 Chy-Chr12:16949768 Chy12g01228 Chy-Chr12:17006735 0 dispersed
Chy12g01225 Chy-Chr12:16986777 Chy12g01223 Chy-Chr12:16949768 2.09E-133 dispersed
Chy12g01229 Chy-Chr12:17018279 Chy12g01223 Chy-Chr12:16949768 1.13E-92 dispersed
Chy12g01222 Chy-Chr12:16943230 Chy12g01223 Chy-Chr12:16949768 1.12E-165 tandem
Chy12g01223 Chy-Chr12:16949768 Chy12g01224 Chy-Chr12:16986164 3.62E-104 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01223 K20617 - csv:101207378 971.459