Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g00297 ATGAAAATCACACAAAACCATACCCTCAGGAAAGAGAGAGAGAGAGTAATGGATCCAACATCCCACAAAAATCTCCACCAACTTCTACAACAAATTACTCAATCTCCATATGGAGGCACCATTATTCACTTCAATCCCATCTCTTTTCCTCTCATCTTCCTCTTCCTCTTCCTCTTCTTCCTACTTTCACTCAAACTCTTATCCACCAAAAATCCCAAAACTACCTTACCACCATCACCACCACAACTCCCAATAATTGGCAACCTTCACCAACTAGGCAGCCTCCCACACCGTTCATTGGCATCTCTTTCAGAGAAATATGGGCCTCTAATGCTCCTCAAACTAGGCCAAACCCCAACTCTCATAGTCTCATCAGCAAAACTAGCTAAAGAAGTAATGAAATCCCATGACACCATCTTCTCAAACAGAGCCCAAAACACAGCTGCAAAATCCTTACTCTATGGATGCCATGATGTGGCCTTTGCTTCCTATGGAGAGTACTGGAGACAAGCCAGAAAATTGTGTGTTTTGGAGCTTTTAAGCGCCAAAAGAGTTGAGTCTTTCCAACATATTAGAGATGAAGAAGTTGAAAAGCTTGTGAAAAGGATTGGTGAGGATTATTCATCTTGTGTGATCAATCTCAACCAACTTTTGATATCAACTTCAAACAATATAGTGGGGAGATGCGTTTTAGGAGAGAAGTTTAAGAGTGGAAATGATGGATTTGGAGAAGTGACAAGGAAGGCAATGGTGCTGTTGTCGGCGTTCTGTGTTGGGGATGCTTTTCCTTGGCTTGGATGGATTGATGTGTTGAGAGGATTTCATGAACAACTCAAAGCCACTTTTGGATCATTGGATAGACTTTTTGTGAAAGTGATTGAAGAACATAGGGAAAAAGTGAAGAGTGGTGATAATAATGCATCTTGTGAGAAGGATTTTGTGGGGATTATGCTAAAGTTGCAACAACAAGACAGTCTCGATCATCGTTTCACCATGGAAGATTTCAAAGCAATTTTACTGGATATGTTCGTAGGTGGAACCGACACAACAGCAACAGGTTTGGAATGGACAATGGTAGAACTGATGAGAAATCCAACAGCCATGAGAAAAGTTCAAGAAGAGGTCAGAGCAATAGTTGGAAAAAAAGCAAAGATTGAAACAAACGACACTCAGAAAATGGAGTACATGAAATGTGTTATAAAAGAATCTCTAAGACTCCATCCACCAGTTCCTCTATTGCTGCCAAGGGAAACAATGGAAAGTGTCAACCTTGAAGGCTACCAAATTCCATCCAAAACCAAGGTTTGGATCAATGCTTGGGCAATTCAAAGAGACCCCAAATTTTGGGAACGTCCAAACCAATTCATCCCAGAGAGATTCATGCAGGAAAAGAGATCAGTTGATTTCAAAGGCCATGACTTTGAGTTCATTCCATTTGGGAGTGGAAGAAGGAAGTGCATTGGAATGTCATTTGGGATTGCTTCTTTTGAATATGGATTGGCCAATCTTCTTTATTGGTTTGATTGGAAGCTTCCAGATGGGGAGTTGTTGGATATGACTGAACAACATGGGCTCTCTGTTTTCAAGAAACTTCCTCTCAATCTTATCCCAATTCCATATTGTGTGTAA 1629 40.76 MKITQNHTLRKERERVMDPTSHKNLHQLLQQITQSPYGGTIIHFNPISFPLIFLFLFLFFLLSLKLLSTKNPKTTLPPSPPQLPIIGNLHQLGSLPHRSLASLSEKYGPLMLLKLGQTPTLIVSSAKLAKEVMKSHDTIFSNRAQNTAAKSLLYGCHDVAFASYGEYWRQARKLCVLELLSAKRVESFQHIRDEEVEKLVKRIGEDYSSCVINLNQLLISTSNNIVGRCVLGEKFKSGNDGFGEVTRKAMVLLSAFCVGDAFPWLGWIDVLRGFHEQLKATFGSLDRLFVKVIEEHREKVKSGDNNASCEKDFVGIMLKLQQQDSLDHRFTMEDFKAILLDMFVGGTDTTATGLEWTMVELMRNPTAMRKVQEEVRAIVGKKAKIETNDTQKMEYMKCVIKESLRLHPPVPLLLPRETMESVNLEGYQIPSKTKVWINAWAIQRDPKFWERPNQFIPERFMQEKRSVDFKGHDFEFIPFGSGRRKCIGMSFGIASFEYGLANLLYWFDWKLPDGELLDMTEQHGLSVFKKLPLNLIPIPYCV 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3652409 3656040 - ClCG03G003130.2 Cla03g00297 268797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g00297 542 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 52 539 - -
Cla03g00297 542 Pfam Cytochrome P450 77 530 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00297 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 479 488 IPR017972 GO:0005506|GO:0016705
Cla03g00297 542 PANTHER CYTOCHROME P450 71B11-RELATED 52 539 - -
Cla03g00297 542 Gene3D Cytochrome P450 64 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00297 542 PRINTS E-class P450 group I signature 104 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00297 542 PRINTS E-class P450 group I signature 486 509 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00297 542 PRINTS E-class P450 group I signature 128 149 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00297 542 PRINTS E-class P450 group I signature 476 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00297 542 PRINTS E-class P450 group I signature 438 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00297 542 PRINTS E-class P450 group I signature 221 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00297 542 PRINTS E-class P450 group I signature 334 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00297 542 PRINTS E-class P450 group I signature 354 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00297 542 PRINTS E-class P450 group I signature 397 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00297 542 PRINTS P450 superfamily signature 486 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00297 542 PRINTS P450 superfamily signature 345 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00297 542 PRINTS P450 superfamily signature 398 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00297 542 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00297 542 SUPERFAMILY Cytochrome P450 77 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla03g00297 Cla06g01705 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00295 Cla-Chr3:3592435 Cla03g00297 Cla-Chr3:3652409 2.06E-139 dispersed
Cla03g00297 Cla-Chr3:3652409 Cla03g00299 Cla-Chr3:3667884 3.45E-146 dispersed
Cla03g00296 Cla-Chr3:3619003 Cla03g00297 Cla-Chr3:3652409 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g00297 K20617 - csv:101208836 805.823