Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g01571 ATGGCTCCAATTTTTTTACTCATTTCCATCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTATTTTTCTTCCAAATTCATAACAACAATAAGTTTCCTAAGAAGAAACTCCCTCCTGGCTCAATGGGTTGGCCTCTAATTGGCGAGACCTTTCATTTTTATTCTCAAGATCCAACCTCCTTCTTTCTTGGAAAACAAAAAAGATATGGGGAGATATTCAAGACCCACATTCATGGATGTCCGTGTGTGATGTTAGCGACTCCCGAGGCGGCTCGGTTCGTGCTAGTGACACAGGCTCATCTCTTCAAACCTACATATCCACAAAGTAAAGAGCGATTAATTGGGCCATCGGCTCTGTTTTTCCACCAAAGTGAAACCCATTTGCGTTTGCGTAAGCTAATCCAAAGCTCTCTGTCACCGGACCCTGTTCGAGCCTTAGTCCCTGACATCCACGCCCTAGCCATCTCTGCATTGCCCTCATGGCTCAATGGCCATCTCATTAACACTTTCCATCAAATGAAGAAGACAAAAACAGAGCTTTCAATAAGTTTTGTGCTCTTAATTGAATCAAATGGGGACCAATTATTCCTTATCAATTGTTTAATTTTAGTGTGTGTATATATATATATTTCTTTTTTTCTTTTTTTCCTCTCCTTTCTCTCGCTGACTTTCAAAGCCTTTGTTTGTTGTCGTTGTCTCTTTTTTCTTCACTCTCCAAAGTTCTCTTTTGAAGTGGGGATTTTGGCAATTTTCGGGCATTTGGAAGACACCAATTACAGAGAGGAACTAATGAAAAACTATTCCATAGTGAACAAAGGCTATAATTCTTTCCCCACCAACATTCCCGGAACGCTTTACAAAAAAGCACTTAAAGCAAGAAAGAGGCTGGGAGAGATCATAAGCTGTATAATCTCAGAGAAAAGGGAGAAAAGAAAAGAATTAGGGGAGAAGAATCTATTAGCGTGTTTGCTAAAATGGAGAGATGAAAATGGAGAAACTTTAAGTGATGAACAGATCGCCGACAACATCATCGGAGTTCTGTTTGCTGCTCAGGACACGACGGCCAGTGTTCTCACTTGGGTTGTTAAATATCTACATGATAACCACAAAGTTCTAGAAGCTGTCAAGGTACGTCACTGCCGACTTTCCGATGTGCTGCAAATATTTCATTTAATTATATATGTTGAATTAAAAGGTTTGAGGATACGTGGATACCCTGAAGGAGAGAGAATAAAACATTTGAATGTCGTGGATTTTTCTTTTTCTTGTTATGCAGTTAATGTAGAAGTGGAACAAAAGGCAATTGAAGAAGGCATTAATGAAGGGAGCCGACCAATGAGCTGGGCTCAGACACGAAACATGCCCTTTACCAACAAGGTAGCACTTAGGAGCAGGACGGATAAATTCAACCATGTGGTGTTGGAGAGCTTGAGAATGGCGAGTATTATATCATTCACTTTTAGAGAAGCTGTGGCAGATGTTGAATATAAAGGTAAGATAGTTGCTCCAAGACCCAATACGTTCATGCCATTTGGCAGTGGGGTCCATGCCTGCCCAGGAAATGACCTTGCCAAGCTTGAAATCTTGATCATGATCCACCATCTAGTCACCAAATTCAGGTGGGAATTGGCAGGACAGAGAGATGGGATTCTGCATGGGCCTTTTCCAGTGCCTATGAATGGGCTTCCCATTAGAGTCTGGAGATTATCCACTTGA 1722 41.0 MAPIFLLISIFLLLLLLLLLLLLFFFQIHNNNKFPKKKLPPGSMGWPLIGETFHFYSQDPTSFFLGKQKRYGEIFKTHIHGCPCVMLATPEAARFVLVTQAHLFKPTYPQSKERLIGPSALFFHQSETHLRLRKLIQSSLSPDPVRALVPDIHALAISALPSWLNGHLINTFHQMKKTKTELSISFVLLIESNGDQLFLINCLILVCVYIYISFFLFFLSFLSLTFKAFVCCRCLFFLHSPKFSFEVGILAIFGHLEDTNYREELMKNYSIVNKGYNSFPTNIPGTLYKKALKARKRLGEIISCIISEKREKRKELGEKNLLACLLKWRDENGETLSDEQIADNIIGVLFAAQDTTASVLTWVVKYLHDNHKVLEAVKVRHCRLSDVLQIFHLIIYVELKGLRIRGYPEGERIKHLNVVDFSFSCYAVNVEVEQKAIEEGINEGSRPMSWAQTRNMPFTNKVALRSRTDKFNHVVLESLRMASIISFTFREAVADVEYKGKIVAPRPNTFMPFGSGVHACPGNDLAKLEILIMIHHLVTKFRWELAGQRDGILHGPFPVPMNGLPIRVWRLST 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 28354854 28360081 - ClCG08G015960.2 Cla08g01571 279226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g01571 573 Gene3D Cytochrome P450 504 571 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 Gene3D Cytochrome P450 233 387 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 Gene3D Cytochrome P450 28 206 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 PRINTS E-class P450 group I signature 340 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 PRINTS E-class P450 group I signature 510 520 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 PRINTS E-class P450 group I signature 520 543 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 SUPERFAMILY Cytochrome P450 34 569 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 513 522 IPR017972 GO:0005506|GO:0016705
Cla08g01571 573 PRINTS P450 superfamily signature 520 531 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 PRINTS P450 superfamily signature 351 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 PRINTS P450 superfamily signature 511 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 Pfam Cytochrome P450 40 143 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 Pfam Cytochrome P450 275 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 Pfam Cytochrome P450 507 549 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 507 569 - -
Cla08g01571 573 PANTHER CYTOCHROME P450 26 429 503 - -
Cla08g01571 573 PANTHER CYTOCHROME P450 26 240 382 - -
Cla08g01571 573 PANTHER CYTOCHROME P450 26 15 182 - -
Cla08g01571 573 PANTHER CYTOCHROME P450 26 507 569 - -
Cla08g01571 573 Gene3D Cytochrome P450 417 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 15 182 - -
Cla08g01571 573 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 429 503 - -
Cla08g01571 573 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 240 382 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla05g02039 Cla08g01571 CCT
Cla05g02039 Cla08g01571 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01055 Cla-Chr7:27115215 Cla08g01571 Cla-Chr8:28354854 4.08E-101 dispersed
Cla08g01571 Cla-Chr8:28354854 Cla06g01400 Cla-Chr6:27533301 5.38E-42 dispersed
Cla02g00599 Cla-Chr2:6511683 Cla08g01571 Cla-Chr8:28354854 2.18E-55 wgd
Cla05g02039 Cla-Chr5:32102232 Cla08g01571 Cla-Chr8:28354854 3.38E-67 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g01571 K09843 - egr:104453198 402.134