Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma01g01805 ATGCATTCAACCATGGAAGAGACGTTGTTGTTGTTCTCTAATTTTGAGGTCCTATTGTTGATCCTCGTTTTAGCTCTCCTGATGATTTTCAAATTCAGAAAAGCGGACCACAAAAATCTCCCACCCGGTCCACCTTCCCTTCCAGTAATCGGCCACCTCCATCTTCTAAAAGAGCCATTCCACCAAATGCTGCAAGATCTCTCGCAAAAGTACGGTCCAATCCTGTCGCTGTCACTCGGTTTCCGCCCCGTGGTGGTTGTTTCCTCCCCCGCCGCCGCCCAGGAGTGCTTTTCCAAAAACGACATCATATTTGCCAGCCGCCCTCGTATGATTTCCGGGAAGATTCTCAATTATGACTACACTGCCGTTGGTGCTACTGCATACGGCCAGCACTGGCGCATCATGCGCCGCATAGCTACCACTGAGCTACTCTCCACGCACCGTCTCAACGCATTAATTAACATCCGACAACAGGAGGTTAAATTATGGCTCAAAAGTTTATACCGAATTACGGGCAAAAATAATGTCCGAGTGGAGATAAGGTCCAAATTGACGGAGCTGTCTTTCAATATTGCGCTGATGTTGATGGTTGGGAAGCGTTACTTTGGAGATGAAGCCGTGGATGATAGTGAGGAGGCGAGGGAGTTGAAGAACACAATGAAGCAAGTTCCTCTACTGAGCGGAGCATCGTATCCAGCTGACTTCTTGTCGGTTTTGAAATTGGTGGATTATCAAGGATTCAGGAAGAAGTTGGCAAAAGTGAGGGTGGATGGCGATGCTTTTGCACAAAGTTTGATTGATGAACGTCGGAACAAGAAAGCTGATCACAATGAACGAAAGACCATGATTGATAGTCTGCTGTCCATGCAACAAATGGAACCTGAATATTACAAGGACCATATCATCAAGGGCCAATTCTTGACTCTTCTGGCTGCGGGAACTGACACAACAGCGGGAACACTAGAGTGGGCGTTGTCGCTACTCCTCAACCATCCGACCGCGATGAAGAAAGCATGGACTGAGATAAACGAGCATGTTGGGGACGAACGGCTGGTAGAGGAGATGGATCTTAACCAGCTACACTATCTTCAAGGCATAATCAACGAGACCTATCGCCTATTTCCAGCGCTTCCAATATTGGTTCCACGAGAATCATCTGAAGACTGCACAATTGGAGGGTTTGACGTTCCGATAGGAACCATGTTAGTGGTGAATGCATGGGCCATCCATCGAGACCCAAAAGTGTGGGAAGATCCCAATAGCTTCCGACCAGAGAGGTTTAAAGAGGGCGAGAGTGTGGAAGTAAGTAAATTGTTGCCATTTGGGATGGGGAGAAGGGCGTGTCCAGGGGCTGGCCTTGCGCACAGAGTGGTGGGGTTGGCGCTGGCCACTCTGATTCAGTGCTTTGAGTGGGAGAGACTCGACAACAAGGAAGTAGACTTGACTCCTGGAATTGGACTCACCATGCCCAAATCCAGCCCTTTGGTAGCTATGTTCAAACCTCGTGCTCCCATCACTCATTTACTATCACAGCTTTGA 1539 48.41 MHSTMEETLLLFSNFEVLLLILVLALLMIFKFRKADHKNLPPGPPSLPVIGHLHLLKEPFHQMLQDLSQKYGPILSLSLGFRPVVVVSSPAAAQECFSKNDIIFASRPRMISGKILNYDYTAVGATAYGQHWRIMRRIATTELLSTHRLNALINIRQQEVKLWLKSLYRITGKNNVRVEIRSKLTELSFNIALMLMVGKRYFGDEAVDDSEEARELKNTMKQVPLLSGASYPADFLSVLKLVDYQGFRKKLAKVRVDGDAFAQSLIDERRNKKADHNERKTMIDSLLSMQQMEPEYYKDHIIKGQFLTLLAAGTDTTAGTLEWALSLLLNHPTAMKKAWTEINEHVGDERLVEEMDLNQLHYLQGIINETYRLFPALPILVPRESSEDCTIGGFDVPIGTMLVVNAWAIHRDPKVWEDPNSFRPERFKEGESVEVSKLLPFGMGRRACPGAGLAHRVVGLALATLIQCFEWERLDNKEVDLTPGIGLTMPKSSPLVAMFKPRAPITHLLSQL 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12029068 12031631 + CmaCh01G018050.1 Cma01g01805 287498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma01g01805 512 Pfam Cytochrome P450 41 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01805 512 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01805 512 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01805 512 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01805 512 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01805 512 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01805 512 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01805 512 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01805 512 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01805 512 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01805 512 SUPERFAMILY Cytochrome P450 41 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01805 512 Gene3D Cytochrome P450 26 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01805 512 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01805 512 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01805 512 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01805 512 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma01g01805 512 PANTHER CYTOCHROME P450 FAMILY PROTEIN 16 507 - -
Cma01g01805 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Cma01g01805 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 16 507 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g01805 Cma09g00267 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01805 Cma-Chr1:12029068 Cma17g01387 Cma-Chr17:9243802 6.74E-173 dispersed
Cma01g01805 Cma-Chr1:12029068 Cma09g00267 Cma-Chr9:1109388 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma01g01805 K13260 - csv:101207242 772.696