Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g00772 ATGGCGGATACGCTGAGCGCTTTGAGACTTCTAATGGCGTCCCATAATCCTCCGCTTGACGCCTTGGTTGTTCCTTCAGAGGACTATCACCAGAGTGAATACGTATCTGCGAGAGATAAGCGACGTGAATTTGTTTCAGGTTTCACCGGAAGTGCTGGTCTGGCACTTATAACCCAGAAACAAGCCTTACTGTGGACCGATGGCCGGTATTTTCTGCAGGCAATTCAGCAGCTTAGTGATCAGTGGAAACTTATGCGAATTGGAGAGGATCCTTCTGAAGATCTCTGGATGGCAGATAATCTGCCAGCGGATGCAGCCGTTGGAGTGGATCCTTGGTGTGTGTCAGTGGACACTGCACAAAAGTGGATCCACACATTTTCCAAGAAGCAGCAGAAGCTGGTTCAAACTTCCACAAACTTAGTTGATGAAGTTTGGAAGAATCGACCACCACCAGAAATAAATCCTGTTATCATACACCCACTTGAATATGCTGGCCGCTCTGTTGAAGATAAGTTGAAGACTTTGAGAGCAAAGCTCTCGCGAGAGAAAGCTCATGGTTTAATTGTGGTTGGACTTGATGAAGTAGCTTGGTTGTACAACATCCGTGGGAGTGATGTGTCATACTGTCCAGTTGTACATGCATTTGCAATAGTGACACTCAATTCAGCATTCTTTTACGTGGAGAAGAGGAAGGTTTCTGATGAGGTGCGCTTGTACATGGAAAAAAATGGAATTGAAGTTCGGGACTATAGTGCAGTAATAACAGATGTGTCCTCACTTGCATCTAATCAACTTAACATGTCATCTAGTTCAATCGACATTGCAGGATCTAATGGAACTAAAGTAGAAAGCCAGAGTTCTGGCCTCATATGGGCTGATCCTGCACAATGCTGCTATGCTTTGTATTCTAAACTGAACTCTGATGAAGTTCTCCTGCAACAGTCGCCATTGGCTCTTGCAAAAGCTCTCAAGAACTCTGTTGAGTTGGACGGACTAAAGAATGCACACATTCGGGATGGTGCAGCTGTTGTACAATATCTTGTGTGGCTGGACAAGCAGCTGCAAGAGACTTATGGGGCTTCTGGTTACTTTCTGGAAGGGGATGGAGTGAGGAAGCCCAAACCTTCGGACTCGGAGAAACTGACAGAAGTTAGTGTAAGTGATAAGCTTGAAGCTTTCCGAGCATCAAAGAAGCATTTTAGAGGCCTAAGTTTCCCTACTATTTCCTCTGTTGGTCCAAATGCTGCAATTATACATTATGGACCACAAGCAGAGACGTGTGCCGAGTTGGATCCTGAAAGCATGTATCTTTTTGACTCAGGAGCTCAGTATTTGGATGGAACAACTGATATCACACGGACAGTCCATTTTGGATTACCTTCAGCTCATGAAAAAGCTTGTTATACTGCAGTTCTCAAAGGCCATATTACTTTGGGAAATGCAAGATTTCCAAATGGCACAAATGGCCAGCAATTGGATATTCTTGCTCGAGTTCCTTTGTGGAAGGATGGTCTGGATTATCTACATGGCACTGGCCATGGAATTGGTTCTTTCCTTAATGTTCATGAAGGGCCTCATTTAATTAGTTTCAGACCTCGTGCTCGAAATGTTCCACTTCAAGCTTCAATGACTGTTACGGATGGCCAGCAATTGGATATTCTTGCTCGAGTTCCTTTGTGGAAGGATGGTCTGGATTATCTACATGGCACTGGCCATGGAATTGGTTCTTTCCTTAATGTTCATGAAGGGCCTCATTTAATTAGTTTCAGACCTCGTGCTCGAAATGTTCCACTTCAAGCTTCAATGACTGTTACGGATGAGCCTGGCTATTACGAGGATGGTGCCTTCGGTATTAGATTGGAGAATGTACTTATAGTAAAGAACGCTGACACAAAATTTAATTTTGGCGATAAAGGCTACTTATCATTCGAGCACATAACATGGGCACCGTACCAGAGAAAGTTGATCAACACAAGTCTTCTCACATCTGAGGAATTGGATTGGTTGAACAGTTACCATTCAAAGTGTAGGGATATTCTTGCTCCTTATTTGGATGAATCCGAGAAGGCATGGCTGAATAAAGCCACTGAGCCAATTCCTGCCTGA 2106 44.02 MADTLSALRLLMASHNPPLDALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITQKQALLWTDGRYFLQAIQQLSDQWKLMRIGEDPSEDLWMADNLPADAAVGVDPWCVSVDTAQKWIHTFSKKQQKLVQTSTNLVDEVWKNRPPPEINPVIIHPLEYAGRSVEDKLKTLRAKLSREKAHGLIVVGLDEVAWLYNIRGSDVSYCPVVHAFAIVTLNSAFFYVEKRKVSDEVRLYMEKNGIEVRDYSAVITDVSSLASNQLNMSSSSIDIAGSNGTKVESQSSGLIWADPAQCCYALYSKLNSDEVLLQQSPLALAKALKNSVELDGLKNAHIRDGAAVVQYLVWLDKQLQETYGASGYFLEGDGVRKPKPSDSEKLTEVSVSDKLEAFRASKKHFRGLSFPTISSVGPNAAIIHYGPQAETCAELDPESMYLFDSGAQYLDGTTDITRTVHFGLPSAHEKACYTAVLKGHITLGNARFPNGTNGQQLDILARVPLWKDGLDYLHGTGHGIGSFLNVHEGPHLISFRPRARNVPLQASMTVTDGQQLDILARVPLWKDGLDYLHGTGHGIGSFLNVHEGPHLISFRPRARNVPLQASMTVTDEPGYYEDGAFGIRLENVLIVKNADTKFNFGDKGYLSFEHITWAPYQRKLINTSLLTSEELDWLNSYHSKCRDILAPYLDESEKAWLNKATEPIPA 701
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6004628 6013065 + CmaCh03G007720.1 Cma03g00772 290343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g00772 701 Pfam Creatinase/Prolidase N-terminal domain 147 328 - -
Cma03g00772 701 Gene3D - 146 320 IPR029149 -
Cma03g00772 701 PANTHER AMINOPEPTIDASE P1 2 547 - -
Cma03g00772 701 PANTHER AMINOPEPTIDASE P1 546 699 - -
Cma03g00772 701 CDD APP 331 636 IPR033740 GO:0070006
Cma03g00772 701 Gene3D Creatinase/methionine aminopeptidase superfamily 322 546 IPR036005 -
Cma03g00772 701 ProSitePatterns Aminopeptidase P and proline dipeptidase signature. 568 580 IPR001131 -
Cma03g00772 701 PANTHER XAA-PRO AMINOPEPTIDASE 1 546 699 - -
Cma03g00772 701 SUPERFAMILY Creatinase/prolidase N-terminal domain 41 130 IPR029149 -
Cma03g00772 701 Pfam Creatinase/Prolidase N-terminal domain 6 142 IPR000587 GO:0016787
Cma03g00772 701 PANTHER XAA-PRO AMINOPEPTIDASE 1 2 547 - -
Cma03g00772 701 SUPERFAMILY Creatinase/aminopeptidase 326 546 IPR036005 -
Cma03g00772 701 Pfam Metallopeptidase family M24 548 627 IPR000994 -
Cma03g00772 701 Pfam Metallopeptidase family M24 380 546 IPR000994 -
Cma03g00772 701 Gene3D Creatinase/methionine aminopeptidase superfamily 547 700 IPR036005 -
Cma03g00772 701 SUPERFAMILY Creatinase/aminopeptidase 549 665 IPR036005 -
Cma03g00772 701 Gene3D - 1 145 IPR029149 -
Cma03g00772 701 Pfam C-terminal region of peptidase_M24 640 699 IPR032416 -
Cma03g00772 701 ProSitePatterns Aminopeptidase P and proline dipeptidase signature. 509 521 IPR001131 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g00772 Cma07g00505 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma12g01071 Cma-Chr12:8468433 Cma03g00772 Cma-Chr3:6004628 4.25E-42 transposed
Cma03g00772 Cma-Chr3:6004628 Cma07g00505 Cma-Chr7:2179002 1.33E-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g00772 K01262 - csv:101216415 1043.49