Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma06g01371 ATGGCTGTTCCCGACAAGGAAAGTAATCCCGGTCACCGGTCGCCCGTCGCCGGGTTGGTTTGGATTGATATCTTAATTCATGATCCGAGAGAGGAAGTGATTCAGGCATGGTATATGGATGATAGTAATGAAGACCAGAGGCTTCCTCATCACCTTGATCCGAAGCAATATTTGTCCCTCCAACAACTTGATGAACTTGGAGTTCTGAGCTGGAGACTGGATGCAGACAAATATGAAACAGATGAGGAATTGAAGAAGATACGTCGTGATCGTAATTACTCCTACATGGACTTTTGCGAGGTCTGTCCAGAAAAGCTTCCTAATTATGAAGAGAAGATTAAGAACTTTTACGAGGAACATTTGCACACCGATGAGGAGATCCGTTACTGTGTGGCAGGGAGTGGTTATTTTGATGTTAGGGATCTGAATGACAAATGGATTCGTATTTGGGTAAAGAAGGGAGCAATGATTGTCTTACCTGCTGGAATTTATCATCGCTTCACTCTGGATTCTGACAACTACATCAAGGCTATGCGACTCTTTGTTGGTGATCCTGTCTGGACTCCTCACAACCGTCCCAACGATCATCTTCCCGCGAGGAAGGAGTATCTAAAAATTTTTGTGGAGAAAGAAGGTGGTAACCAAACCATTAACGCTGCAGCTTGA 666 44.29 MAVPDKESNPGHRSPVAGLVWIDILIHDPREEVIQAWYMDDSNEDQRLPHHLDPKQYLSLQQLDELGVLSWRLDADKYETDEELKKIRRDRNYSYMDFCEVCPEKLPNYEEKIKNFYEEHLHTDEEIRYCVAGSGYFDVRDLNDKWIRIWVKKGAMIVLPAGIYHRFTLDSDNYIKAMRLFVGDPVWTPHNRPNDHLPARKEYLKIFVEKEGGNQTINAAA 221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8954752 8958236 - CmaCh06G013710.1 Cma06g01371 296925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma06g01371 221 Pfam ARD/ARD' family 35 189 IPR004313 GO:0010309
Cma06g01371 221 PANTHER 1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 1 25 219 - -
Cma06g01371 221 SUPERFAMILY RmlC-like cupins 35 207 IPR011051 -
Cma06g01371 221 CDD cupin_ARD 60 189 IPR004313 GO:0010309
Cma06g01371 221 Gene3D Jelly Rolls 23 209 IPR014710 -
Cma06g01371 221 PANTHER ACIREDUCTONE DIOXYGENASE 25 219 IPR004313 GO:0010309
Cma06g01371 221 Hamap 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [ADI1]. 34 197 IPR027496 GO:0016491|GO:0019509
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g01371 Cma17g00207 CCT
Cma06g01371 Cma14g01745 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g01745 Cma-Chr14:12761925 Cma06g01371 Cma-Chr6:8954752 1.04E-134 wgd
Cma17g00207 Cma-Chr17:1073070 Cma06g01371 Cma-Chr6:8954752 2.02E-88 wgd
Cma06g01371 Cma-Chr6:8954752 Cma08g01124 Cma-Chr8:6953686 4.75E-08 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma06g01371 K08967 - csv:101222292 387.882