Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00505 ATGGCGGATTCTCTGAGCGCTTTGAGGCTTCTAATGGCGTCCCATGCTCCTCCTCTTGACGCCTTGGTTGTTCCTTCTGAGGATTATCATCAGAGTGAATATGTATCTGCGAGAGACGAACGACGTGCATTTGTTTCAGGTTTCACCGGAAGTGCTGGTCTGGCACTTATAACCCAGAGAGAAGCATTACTGTGGACCGATGGGCGTTATTTTCTGCAGGCAATTCAACAGCTCAGCGATCAGTGGAAGCTTATGCGAATTGGAGAGGATCCTCCTGTAGATCTCTGGATGGCAGATAATCTTCCAGCGGATGCAGCTGTTGGAGTGGATCCTTGGTGTGTGTCAGTAGACACTGCACAAAAGTGGATTCACGCATTTGCTAAAAAGCAGCAGAAGCTGGTTCAAACCACCACCAACTTAGTTGATGAAGTTTGGAAGAATCGACCACCACCAGAAATAAATCCTGTTATCATACACCCGCTGGAATATACTGGCTGCTCTGTTGAAGATAAGTTGAAGACTTTGAGAGCAAAACTTTCACAAGAGAAAGCTCATGGTTTAATTGTGACTGGTCTTGATGAAGTTGCTTGGTTATACAATGTCCGTGGGAGTGATGTTTCATACTGTCCAGTTGTACATGCATTTGCAATAGTGACACTCAACTCAGCGTTTTTTTACGTGGACAAGAGGAAGGTGTCTGACGAGGTACGCTTGTACCTGGAGAAAAATGGAATTGAAGTTCGGGATTATAGTGCAGTAATAGTAGATGTATCTTCACTTACATCTAATCAACAAAACTTGTCATCTTTTGTAAAAGGACCTGAAGGCAGCGCTACTGTAGAGGAACTTAGTTCGATTGACATAACAGGGTCTAATGGAACTGAAGTGGAAAGCCAGAGTCCTGGCCTTGTATGGGTTGATCCTGCTCAATGCTGCTATGCTTTGTATTCTAAACTGAACTCTGATAAGGTTCTCCTGCAACAGTCGCCATTGGCCCTTGCAAAAGCTCTAAAGAACTCTGTTGAGTTGGATGGACTAAAGAATGCACACATTCGGGATGGTGCAGCTGTTGTACAATATCTTGTGTGGCTGGATAAGCAGCTGCAAGAGACTTATGGGGCTTCTGGGTACTTTTTGGAAGGGGATGGAGCGATGCAAATGAAGCAAGCCTTACATTTTGTTTGTGCTTTTCAGCATTTCAGAGGCTTAAGTTTCCCTACGATTTCATCTGTTGGTTCAAATGCTGCAATTATACATTATGGACCACAAGCAGAGACATGCGCGGAGTTGGATCCTGAAAGCATCTATCTTTTTGACTCAGGGGCTCAGGTTCTCAAAGGCCATATTGCTTTGGGAAATGCAAGATTTCCAAATGGCACAAATGGCCATGCGTTGGATATTCTTGCTCGAGTTCCTTTGTGGAAGGATGGTCTGGATTATCGACATGGCACTGGCCATGGAATTGGTTCTTTCCTTAATGTTCATGAAGGACCCCATTTGATTAGTTTCAGACCCCAGGCTCGAAATGTTCCACTTCAAGCTTCAATGACTGTAACGGATGAGCCTGGCTATTATGAGGATGGCGCCTTCGGTATTAGGTTGGAGAACGTACTTATCGTGAAGGATGCCGACACAAAATTTAATTTTGGCATGGCTGGAGAAGGCCACCGAGCCAATAACTGCCTGATCATCATCTCTGTGTGTCCTAAACTGATCAACGGACCAAGAGTGCTGAGCCTCACAATGCTGAAGTGCTTATTGGTCATAGCTTCCTTGGTCCTCTCCTCCGCTTTTGCACAGAAACAGAGCCCTCCAAAAGATCCAAATGAGGAATGGCTCACGTTGACAGGGGAAGAGCCTATAGTGGTAGCAAGGGGTGGGTTTTCTGGAGTGTTTCCTGAATCGAGCGCGCTTGCAAATGAATTAGCAGTGTCTAATGGTTTACCGAACACTGTTTTGTACTGCAACCTCCAACTAACCAAAGATGGGCTTGCTATTTGCTTATCTGATATTCTGCTTGAAAACTCAACCAACATTGAACAAGTCTTCCCTAAATCTCGTAAGACTTACGAAATCAATGGAAAGGTTTACAAAGGATGGTTTTCGGTTGATTTCATGTCTGATATTCTCTTTACCAAAGTCGCCTTGGTTCAAGGTATCATGTCCCGCCCTAGTGTGTATGATGGTGTTTGGCCAATTTCTGCTGTTGACGATGTCTTAGGACTGAAACGACCTGTTTGGTTGAACGCTGAGTGGGAAACATTCTACCAAGAACACAATCTGAGTATCATATCATTCATTCAAAAGGCATTGAGACTGATGCCCATAGACTTTGTGTCATCTTCCGAAATTGGAATAGTGAAAGGGCTAGGTGGGGCTGTGAACAGCGCCAAAACAAAGCTCATCTTTCGGTTCTTAGGAGCCACTGAAACAGAGCCAACAACAGGAAAACAATACGGTGACTTGCTTCATGAGCTGGCCATGATAAAGACGATTGCCTCGGGAATTGCGGTCCCAAAATCATACATTTGGCCAGTTAGTCGAGAAGAGTATGTGCTGCCTGCAACAACTGTTGTGATGGATGCCCATAAGCTTGGCTTGGAAGTCTATGCTCATGGCTTTGCAAACGATGCCGTTGTTGGTTACAATTATAGTTATGATCCTGTCCGTGAGTACATTCCGTTTATTGATAATGGCAAATTTGCTGTTGATGGTTTGATTACTGATTACATTCCTACTGCTTCTGAAGCCATTGCCTGCTATGTCAGTTTTCGCAACCCCATCAACTCTCCACGTGTCGGAGAAGACCCGTTGGTGATAAGCAGCAATGGGGCAAGTGGGGATTACCCAGGGTCAACAGACCTTTCATACGAAGCAGCAATTGAGGATGGGACTGACGTAATTGATTGTTCAGTACAAATATCAAAAGATGGAGTTCCTTTCTGCATGGAAACCAGTGATCTTTTGCCAACTACCACTGCAATCATTGCTTTCAATGATAAAACTACGGCTGTTCCCGAACTTCAACAAGATCCTGGAATCTTCTCTTTTGATCTTACTTGGCCTCAGATTCTAACATTGAAACCTCAAATCACTAACCCTTTCCTGGGTTCTTCTGGGCTTGTCCGAAATCCTGCCTTTAAGAACAAGGGCAAATTCATGTCCCTCTCTGACTTTCTCGAGTTCGCCAAAGCCAAAGGTGTTTATGGGATCATGATCAACCTCCAAAATGCGGCCTTCTTGGCTGCAAAGAAAGGTATTGACTTGGTGGGAATCGTATCGACGACAATGATCGACGCGCATATGGAGAAGGAATCAACACTAAACGTTTTTATAAGGTCGGATGACACTTCAGTGTTGACCGCTTTCAAAACCAATTTCCCAACTTTCATAAGAGTTTTAACTGTTGATGGCAAGTATGGGGAAGTCCCCAAAAAGGTCGCTGACGAGATCAAAATCCATGCTGACGCTGTTGCCGTTCCTCGTTCCGCCCTAGTCGAAATCACCAACTATTTTACGGTTAGCAGCACGGATGTGGTTGCTCAATTGAAGTCCGCCAATCTCTCTGTTTTCGTTTACGTCGTAAGGAATGAATACGTGTCCTTAGCCTTTGATTACTACTCCCAAGCCTCTCTCGAAGTCTCCACATACGTCGACTTCTTCCACGTTGACGGCGTTATCACTGACTTCCCTTATACTGCAAAACGATACATAACATGTCCGTGTCGGCCAGTTGTCACCACCCTTGGATATTCGATCTTACCGCCAGAAGTTGGAACACTCCTTGCTCTGGTGCCGGAAGAGGTTAGACCACGTGTGGATCCTCCCTCGCCTCCATTGGATGGAAAAGCTATCGTCGACCCACCGCTACCGCCGGTGAGCAATGTGTCGACCACCGGCCCTTCAGTCCCTGCCACTGCCGCCGCTGTACCAAATATTTCTAACTTCTTCCTATCTTTACTCTCAGTTGTTGTGCTCACTTTCCATGCTCACTCTATACTGTAA 4005 45.22 MADSLSALRLLMASHAPPLDALVVPSEDYHQSEYVSARDERRAFVSGFTGSAGLALITQREALLWTDGRYFLQAIQQLSDQWKLMRIGEDPPVDLWMADNLPADAAVGVDPWCVSVDTAQKWIHAFAKKQQKLVQTTTNLVDEVWKNRPPPEINPVIIHPLEYTGCSVEDKLKTLRAKLSQEKAHGLIVTGLDEVAWLYNVRGSDVSYCPVVHAFAIVTLNSAFFYVDKRKVSDEVRLYLEKNGIEVRDYSAVIVDVSSLTSNQQNLSSFVKGPEGSATVEELSSIDITGSNGTEVESQSPGLVWVDPAQCCYALYSKLNSDKVLLQQSPLALAKALKNSVELDGLKNAHIRDGAAVVQYLVWLDKQLQETYGASGYFLEGDGAMQMKQALHFVCAFQHFRGLSFPTISSVGSNAAIIHYGPQAETCAELDPESIYLFDSGAQVLKGHIALGNARFPNGTNGHALDILARVPLWKDGLDYRHGTGHGIGSFLNVHEGPHLISFRPQARNVPLQASMTVTDEPGYYEDGAFGIRLENVLIVKDADTKFNFGMAGEGHRANNCLIIISVCPKLINGPRVLSLTMLKCLLVIASLVLSSAFAQKQSPPKDPNEEWLTLTGEEPIVVARGGFSGVFPESSALANELAVSNGLPNTVLYCNLQLTKDGLAICLSDILLENSTNIEQVFPKSRKTYEINGKVYKGWFSVDFMSDILFTKVALVQGIMSRPSVYDGVWPISAVDDVLGLKRPVWLNAEWETFYQEHNLSIISFIQKALRLMPIDFVSSSEIGIVKGLGGAVNSAKTKLIFRFLGATETEPTTGKQYGDLLHELAMIKTIASGIAVPKSYIWPVSREEYVLPATTVVMDAHKLGLEVYAHGFANDAVVGYNYSYDPVREYIPFIDNGKFAVDGLITDYIPTASEAIACYVSFRNPINSPRVGEDPLVISSNGASGDYPGSTDLSYEAAIEDGTDVIDCSVQISKDGVPFCMETSDLLPTTTAIIAFNDKTTAVPELQQDPGIFSFDLTWPQILTLKPQITNPFLGSSGLVRNPAFKNKGKFMSLSDFLEFAKAKGVYGIMINLQNAAFLAAKKGIDLVGIVSTTMIDAHMEKESTLNVFIRSDDTSVLTAFKTNFPTFIRVLTVDGKYGEVPKKVADEIKIHADAVAVPRSALVEITNYFTVSSTDVVAQLKSANLSVFVYVVRNEYVSLAFDYYSQASLEVSTYVDFFHVDGVITDFPYTAKRYITCPCRPVVTTLGYSILPPEVGTLLALVPEEVRPRVDPPSPPLDGKAIVDPPLPPVSNVSTTGPSVPATAAAVPNISNFFLSLLSVVVLTFHAHSIL 1334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2179002 2190893 + CmaCh07G005050.1 Cma07g00505 297820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00505 1334 ProSiteProfiles GP-PDE domain profile. 937 1238 IPR030395 GO:0006629|GO:0008081
Cma07g00505 1334 ProSiteProfiles GP-PDE domain profile. 620 918 IPR030395 GO:0006629|GO:0008081
Cma07g00505 1334 Gene3D - 1 145 IPR029149 -
Cma07g00505 1334 Pfam Creatinase/Prolidase N-terminal domain 6 142 IPR000587 GO:0016787
Cma07g00505 1334 Gene3D - 146 334 IPR029149 -
Cma07g00505 1334 Pfam Creatinase/Prolidase N-terminal domain 147 342 - -
Cma07g00505 1334 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL6-RELATED 582 1328 - -
Cma07g00505 1334 Gene3D Phosphatidylinositol (PI) phosphodiesterase 935 1239 IPR017946 GO:0006629|GO:0008081
Cma07g00505 1334 Gene3D Phosphatidylinositol (PI) phosphodiesterase 618 918 IPR017946 GO:0006629|GO:0008081
Cma07g00505 1334 SUPERFAMILY Creatinase/prolidase N-terminal domain 39 124 IPR029149 -
Cma07g00505 1334 Pfam Glycerophosphoryl diester phosphodiesterase family 943 1231 IPR030395 GO:0006629|GO:0008081
Cma07g00505 1334 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 582 1328 - -
Cma07g00505 1334 Pfam Metallopeptidase family M24 444 541 IPR000994 -
Cma07g00505 1334 Pfam Metallopeptidase family M24 384 448 IPR000994 -
Cma07g00505 1334 ProSitePatterns Aminopeptidase P and proline dipeptidase signature. 482 494 IPR001131 -
Cma07g00505 1334 Gene3D Creatinase/methionine aminopeptidase superfamily 444 613 IPR036005 -
Cma07g00505 1334 Gene3D Creatinase/methionine aminopeptidase superfamily 336 443 IPR036005 -
Cma07g00505 1334 SUPERFAMILY PLC-like phosphodiesterases 937 1238 IPR017946 GO:0006629|GO:0008081
Cma07g00505 1334 SUPERFAMILY PLC-like phosphodiesterases 620 917 IPR017946 GO:0006629|GO:0008081
Cma07g00505 1334 SUPERFAMILY Creatinase/aminopeptidase 303 543 IPR036005 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g00772 Cma07g00505 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g00505 Cma-Chr7:2179002 Cma09g00980 Cma-Chr9:4982997 5.67E-162 dispersed
Cma03g00774 Cma-Chr3:6014474 Cma07g00505 Cma-Chr7:2179002 0 transposed
Cma03g00772 Cma-Chr3:6004628 Cma07g00505 Cma-Chr7:2179002 1.33E-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00505 K01262 - csv:101216172 985.326