Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma08g01095 ATGGTTGCAGAGCCTTGGATTGTGAAAATGGGGAACCAGGTTAGCGCTAATCTCAAGCAAGCCCTTCTCGAACCTTCAAAGAATAAGAGCAATACTAAGCAAACAATCGATATTCTCTCTTTTGAAGTTGCTAATGTAATGTCCAAAACGATTTACCTTCATAAATCCCTGTCTGATTCGGCCATTTCAAAGCTCAAGAACGACATCTTGAGCTCTGATGGAGTTAGGAACCTCGTGTCCTTTGATGAGGTTCATCTTCTCGAGCTTGTGGTTGCAGAGAAGCTGGAGGATTTGAACCGAGTGGCTCATGTGGTTTCTAGGCTTGGGAAGAAGTGTTCTCAACCTGCGTTACAGGGTTTTGAACATGTTTATCTGGATATCATTAATGGGGTTATAAATGTGAAGGAATTGGGGTTTTTGGTTAAGGATATGGAAGGGATGATGAAGAAAATGGAGAGGTTTGTGAATGCTACGGCCAATTTGTACACTGAAATGGAGGTTTTGAATGAATTGGAACAGGCTGCTAAGAAGTTTCAGAATAATCAACATGAAGAGAGTAGAAAAGCTTATGAACAGAAACTTATATGGCAGAAACAAGACGTGGGGCATCTCAAAGAGATTTCTCTTTGGAACCAAACCTTTGATAAGGTTGTTGAATTGCTAGCTAGAACTGTTTGTACTGTTTATGCAAGGATTCATTTGGTATTTGGAGACTCTTTTCTGAAGAAGGATGTTGAGATTGGTTCAGAGTCATTGGAATCGAAGCGTGTGTCACGCCCCGGACCGAGACGAGGCTCGAGTTTCAAGTCTCAAATTAGCACAAGAAGAGGCGAGGTTCCGTTGTTTACACCTGATGACTTCAATTTCCCTTGCGGAACCAATCCCGGGAGGCTTTTGATGGATTGTCTCAGTTTAAGTAGTTCAGTTTCCAAGAGGGATGAGGAGGAGGAGGAGGACGAGAACGGTTATGATGATCGGAGCTTCCGAATCTCCGGTTGTAGCATTAGGAATAGTGGCTCGAGTCATTTCGGTTCGTTCAGTCAGGTCCAGTTCTCTGTTCCATTTGGGGTAGAGCAAAGACAAGCCAAAAGTGTGATGTCTAACAATGGAGGAAGTTTTGGATTCAAGAGTAGGTTATCTGTCTATGCCCCGGTTTCGACTGTTGGAGGCTCGGCTCTTGCTTTGCATTATGCCAATATCATCATTGTCATAGAAAAGTTGCTTCGTTATCCTCATTTAGTTGGAGACGAAGCTCGGGACGATTTGTATCAGATGCTACCAACGAGTTTAAGAACATCCCTGAATAAACATCTGAAGTCCTATGTTAAGAGCCTAGCCATATATGATGCTCCGCTTGCGCATGATTGGAAGGAGACACTCGACGGGATCTTGAGCTGGCTTGCTCCATTGGCACACAATATGATTCGATGGCAAAGCGAGCGCAATTTCGAACAACATCAGATTGTGACACGGACTAACGTTTTGCTAATCCAAACTATTTACTTCGCTGATTGCAAGAAAACCGAGGACGCCATATGTGAGCTTCTTGTTGGATTGAATTACATTTGTCGTTACGAGCATCAGCAAAATGCATTGCTGGATTGCGCGAGTAGTTTCGACTTCGAAGATTGTATGGAGTGGCAGTTGCAATGTAAAGCTTCATATCTTAGTTGA 1674 43.19 MVAEPWIVKMGNQVSANLKQALLEPSKNKSNTKQTIDILSFEVANVMSKTIYLHKSLSDSAISKLKNDILSSDGVRNLVSFDEVHLLELVVAEKLEDLNRVAHVVSRLGKKCSQPALQGFEHVYLDIINGVINVKELGFLVKDMEGMMKKMERFVNATANLYTEMEVLNELEQAAKKFQNNQHEESRKAYEQKLIWQKQDVGHLKEISLWNQTFDKVVELLARTVCTVYARIHLVFGDSFLKKDVEIGSESLESKRVSRPGPRRGSSFKSQISTRRGEVPLFTPDDFNFPCGTNPGRLLMDCLSLSSSVSKRDEEEEEDENGYDDRSFRISGCSIRNSGSSHFGSFSQVQFSVPFGVEQRQAKSVMSNNGGSFGFKSRLSVYAPVSTVGGSALALHYANIIIVIEKLLRYPHLVGDEARDDLYQMLPTSLRTSLNKHLKSYVKSLAIYDAPLAHDWKETLDGILSWLAPLAHNMIRWQSERNFEQHQIVTRTNVLLIQTIYFADCKKTEDAICELLVGLNYICRYEHQQNALLDCASSFDFEDCMEWQLQCKASYLS 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6821815 6823488 + CmaCh08G010950.1 Cma08g01095 299790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma08g01095 557 MobiDBLite consensus disorder prediction 251 272 - -
Cma08g01095 557 Pfam Domain of unknown function (DUF3475) 38 94 IPR021864 GO:0045927
Cma08g01095 557 Pfam Protein of unknown function (DUF668) 387 476 IPR007700 GO:0045927
Cma08g01095 557 PANTHER PLANT/PROTEIN (DUF668) 1 551 - -
Cma08g01095 557 PANTHER BNAC09G50660D PROTEIN 1 551 - -
Cma08g01095 557 Coils Coil 168 188 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma08g01095 Cma17g00175 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g02534 Cma-Chr4:17365265 Cma08g01095 Cma-Chr8:6821815 2.16E-45 dispersed
Cma06g00436 Cma-Chr6:2020599 Cma08g01095 Cma-Chr8:6821815 2.47E-71 dispersed
Cma08g01095 Cma-Chr8:6821815 Cma14g00267 Cma-Chr14:1146642 1.50E-65 dispersed
Cma17g00175 Cma-Chr17:904430 Cma08g01095 Cma-Chr8:6821815 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma08g01095 - - csv:101220789 962.214