Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00189 ATGGAACACCTTTACGCCCTCGCCGGAATAATCTTCCCCTTTCTTTTCTTTGTCTATGTTCTCTTCACTTCGTCCCGGAGATCTGTCGCTCATCGGAAGAGGATCCCACCGGAGGCCGGTGGTGCTTGGCCGGTGATTGGCCACCTCCATCTGCTCCATGCAGGAGACCCAACTCACATAGCGTTGGCCAAAATGGCAGATGCCTATGGGCCCATGTTTACGTTAAGGTTCGGTATGAAAAAGGCCTTGGTTGTCAGCAGTTGGGAAATAGCAAAGGAGTTTCTTACTACAAACGACAGAATCTTCGCCTCTCGTCCAAAGCTTGTGGCCTCAAAGCTTCTTGCCTATGATTATGCAATGATGGGGTTCAGCCCATACACTCCACACTGGCGCCAAGTGCGCAAAATAGCCACGCTCGAGCTCCTCACTAACCACCGCCTGGAGCAGCTCCAACACATCAGAGTATTTGAGGTACAGCGGTGGATGAAAGAGCTACACAAAATGAGTATTAGAAGCAATGAAAGAGGTGATAAAGTGGCGGTGGAAATGAAGAAGTGGTTGGCAGACATAACCCTGAATACCATATTCAAGATGGTGATTGGAAAGAGATTCTCCGCCATCCAACATGGTACTGAAAACTTCCCCAAGGCGTTGATAGATTTCTTTGGATTGTTCCATATATTCGTTCCTTCGGATTCGTTTCCGTTTCTGAGTTGGTTGGACTTGGGAGGACATGAGAAGACAATGAAGAAGACAGCCAAAGTAATAGATGAGGCTTTTCATAAATTCCTCCAACAACATCGGGAGAGAAGAAACGAGGGCCAAGCGGAGACGGCGGAGCAGGACTTCATGGATGTGATGATTTCTAGAGTTGAAGAAGATGAACAACACTTCAGCTACGATGCCGATACAGTCATTAAAGCTACATGCTTGAATATGATAGTAGGCGGATTTGACACAACCGCGGTTACCATGACATGGGCTCTTTGTTTACTCCTCAATAATGAAGAAGCCCTCAAGAAGGTCCAACTTGAATTAGACGAAAAAGTTGGAAGATCAACCCAAGTAAAAGAGTCTGATGTAAAAAATCTACCATATCTCCAAGCTATTGTTAAGGAAACTCTACGGTTGTATCCTGCTGTACCGTTAATGGCCCCTCATGAATCAGTCGAGGATTGCACAGTCGCTGGCTACCACATCTGCAAAGGGACACGTCTCATAGTTAATGTTCAAAAGCTCCAAAAAGACCCACGTGTTTGGGAAGAACCTAATGAATTTTGTCCAGAAAGATTTGTAACTAGCCAAAAGAACTTTGATGTTAGAGGACTAAGTCCACAATTCATACCATTTGGAAATGGACGAAGGATGTGCCCTGCAATCTCCTTTGCGCTTCAAGTAATGCATATCACACTTGCAAACTTTCTACATGGGTTTGAAATTGAGAGGCCATCAGAAGAACTCCTCGACATGGAAGAGGGTATGGGATTGACCAGCCTTAGAAAAGCTCCACTTGAAGTTGTCTTAACTCCACGCTTACCTGCCCATATTTATGAGTCATCTCGCAATCGTATTCTGTAA 1578 45.31 MEHLYALAGIIFPFLFFVYVLFTSSRRSVAHRKRIPPEAGGAWPVIGHLHLLHAGDPTHIALAKMADAYGPMFTLRFGMKKALVVSSWEIAKEFLTTNDRIFASRPKLVASKLLAYDYAMMGFSPYTPHWRQVRKIATLELLTNHRLEQLQHIRVFEVQRWMKELHKMSIRSNERGDKVAVEMKKWLADITLNTIFKMVIGKRFSAIQHGTENFPKALIDFFGLFHIFVPSDSFPFLSWLDLGGHEKTMKKTAKVIDEAFHKFLQQHRERRNEGQAETAEQDFMDVMISRVEEDEQHFSYDADTVIKATCLNMIVGGFDTTAVTMTWALCLLLNNEEALKKVQLELDEKVGRSTQVKESDVKNLPYLQAIVKETLRLYPAVPLMAPHESVEDCTVAGYHICKGTRLIVNVQKLQKDPRVWEEPNEFCPERFVTSQKNFDVRGLSPQFIPFGNGRRMCPAISFALQVMHITLANFLHGFEIERPSEELLDMEEGMGLTSLRKAPLEVVLTPRLPAHIYESSRNRIL 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 786089 788066 - CmaCh09G001890.1 Cma09g00189 300194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00189 525 Pfam Cytochrome P450 39 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00189 525 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00189 525 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00189 525 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00189 525 PANTHER CYTOCHROME P450 33 518 - -
Cma09g00189 525 SUPERFAMILY Cytochrome P450 42 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00189 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Cma09g00189 525 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00189 525 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00189 525 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00189 525 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00189 525 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00189 525 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00189 525 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00189 525 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00189 525 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00189 525 Gene3D Cytochrome P450 20 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00189 525 PANTHER CYTOCHROME P450 82C3-RELATED 33 518 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g01881 Cma09g00189 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01880 Cma-Chr1:12321737 Cma09g00189 Cma-Chr9:786089 0 dispersed
Cma01g01881 Cma-Chr1:12325303 Cma09g00189 Cma-Chr9:786089 0 dispersed
Cma01g01882 Cma-Chr1:12328508 Cma09g00189 Cma-Chr9:786089 8.15E-79 dispersed
Cma09g00189 Cma-Chr9:786089 Cma10g00902 Cma-Chr10:4487419 0 dispersed
Cma09g00188 Cma-Chr9:783152 Cma09g00189 Cma-Chr9:786089 0 tandem
Cma09g00189 Cma-Chr9:786089 Cma09g00190 Cma-Chr9:789512 2.02E-125 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00189 - - csv:101212976 818.535