Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00372 ATGGGTATGAAGAGGAAGTTGACATGGAAATCGATGATCGTTCCGAGTTGCTACACGGCGGCGCTCCGCCGTCTATCGGAGTCCGACGATGACGAGCGGCGGCAGGTTTCTAAAAAAGCTTCGTCGCAGAGGCTGTCGCTGTCGGACGCCAGTAACCCGAGTTCGGTCTTGTCGATCGACGACTTGTCGAATTCTCTTGTCGGACCGAAGCTTCATATTTTTTCCTTTGCGGAACTTCGAACCATCACTCACAATTTCGCTTCGTCCAATTTGCTTGGTGAAGGCGGGTTCGGTCCGGTCTACAAAGGCTTCGTCGATGATAAAATCAAACCGGGTTTGGAAGCTCAGCCGGTCGCCGTTAAATTGCTCGACCTCCATGGATCCCAAGGCCATAAAGAATGGCTGGCAGAGATTATAATTCTAGGGCAAATGAGGCATCAAAATTTGGTGAAACTAATCGGTTACTGTTGGGAAGAAGATTACAGGCTTTTGGTTTACGAGTATATGGCCAGAGGCAGTTTAGAAAACCAGCTATTTAGAAAGTATTCAGCTGCTTTACCTTGGTCAACGAGGATGAAAATTGCTTTAGAAGCAGCCAAAGGCCTTCAATTCCTACACGAAGCCGATCCACCCGTTATATTCAGGGATTTCAAAACTTCTAATATCCTCTTGGATTCTGATTATACAACGAAGCTTTCAGATCTTGGGTTAGCTAAAGATGACGTTGACTGTGAAGACCAACCAGACACGTCTTGTATTATGGGAACTCAAGGCTATGCCGCTCCTGAGTACGTCAAATCTGGCCATTTGACGACGATGAGTGACGTGTACAGCTACGGCGTCGTTCTACTAGAGCTGCTGACGGGGAAGCGGTCAATGGACCGAAAGATCGGCGAGTTTCTAGTGGACTGGGCTAAGCCATTTCTAAAGGACTCGAAACGGCTCTACCGGATCATGGACCCAAAGCTCGAGGGCATGTACTCGGCCGACGGCGCTCGTAAGGCCGCCGCCTTAGCTCATAAATGCTTGAGCCGCAGCCCCAAGCGACGGCCTTCCGTGACGGAAGTCGTTAATGTGTTGAAGTCTTTGCAAGACTTTAACGACGTGTGCACGGAGCCGTTTGTTTACGTGGTGGAGGACTGCGGCGGGGAGGAGGAGAAGAAGGGAAGAGATGGGAGAGTTATTGAAGGGGATGTGCTTGGGCTTGGTGGGCTGGGCCTAGGCCTGAATTGGAAAAACTGGAGGCCCATCTCTTGTCGACGCCGGAAAATGGCAGTCGGTGTGAGAGTTGCCGGGAGTATTATCGGCCGCGATCGAGTTCTCACGGCGGTTATTGCCGGCGCGTCTAGTCTTTCGTTCGTGGGATCAGGATTCATAGTGCTGTGTTACGTCCTCTTCAAAGAACTTCGCAAGTTCTCCTACAAGCTTGTCTTCTATCTTGCACTCTCTGATATGCTTTGCAGTTTCTTCACTATGATTGGGGATCCGGCAACGGGATTTTACTGTTATACTCAGGGCTATAGCACTCATTTCTTTTGTGTGGCATCGTTCTTGTGGACCACAACAATTGCATTCACTCTTCACCGTACTGTTGTTAGACACAAAACCGACGTTGAAGATTTGGAGGCTATGTTTCACTTATATGTATGGGGAACATCGTTAGTGTTGACTGTTATACGTTCAATTGGTAATAACCATGGACATTTGGGTACCTGGTGTTGGGCACAGTCTAGTCGTACAGGAAAGGCTGTTCACTTTATAACATTTTACATGCCACTCTGGGGTGCAATTCTCTACAATGGGTTTACTTACCTTCAAGTGATACGCATGCTTAATAATGCTACCCGTATGGCAGTTGGCATCTCAGATAGGGCTTACCAGTCAGATGCTAGAGCAGACATGAAGGCTTTAAACAGATGGGGATATTATCCGCTCATCCTCATAGGGTCATGGGCTTTTGGTACAATCAGCCGCATTCATGATTTTATTGAGCCAGGTCATAAAATCTTCTGGTTGTCAGTTCTTGATGTTGGGATGGCTTCACTAATGGGCTTGTTCAATTCAATAGCATATGGTCTGAATTCTTCTGTACGGCGGGCAATTTATGAAAGATTAGACTTGTTTTGGCCTGAGAAGCTTCGAAGATGGCTCCCCAACAATTCAAGGTTCCGGAACCAAGAACAAGAAGGTGAACTGGTTTCCTTGAGAAGTCTAGATCAGCCATAG 2226 47.75 MGMKRKLTWKSMIVPSCYTAALRRLSESDDDERRQVSKKASSQRLSLSDASNPSSVLSIDDLSNSLVGPKLHIFSFAELRTITHNFASSNLLGEGGFGPVYKGFVDDKIKPGLEAQPVAVKLLDLHGSQGHKEWLAEIIILGQMRHQNLVKLIGYCWEEDYRLLVYEYMARGSLENQLFRKYSAALPWSTRMKIALEAAKGLQFLHEADPPVIFRDFKTSNILLDSDYTTKLSDLGLAKDDVDCEDQPDTSCIMGTQGYAAPEYVKSGHLTTMSDVYSYGVVLLELLTGKRSMDRKIGEFLVDWAKPFLKDSKRLYRIMDPKLEGMYSADGARKAAALAHKCLSRSPKRRPSVTEVVNVLKSLQDFNDVCTEPFVYVVEDCGGEEEKKGRDGRVIEGDVLGLGGLGLGLNWKNWRPISCRRRKMAVGVRVAGSIIGRDRVLTAVIAGASSLSFVGSGFIVLCYVLFKELRKFSYKLVFYLALSDMLCSFFTMIGDPATGFYCYTQGYSTHFFCVASFLWTTTIAFTLHRTVVRHKTDVEDLEAMFHLYVWGTSLVLTVIRSIGNNHGHLGTWCWAQSSRTGKAVHFITFYMPLWGAILYNGFTYLQVIRMLNNATRMAVGISDRAYQSDARADMKALNRWGYYPLILIGSWAFGTISRIHDFIEPGHKIFWLSVLDVGMASLMGLFNSIAYGLNSSVRRAIYERLDLFWPEKLRRWLPNNSRFRNQEQEGELVSLRSLDQP 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1552313 1558852 + CmaCh09G003720.1 Cma09g00372 300377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00372 741 PRINTS Putative plant GPCR, GCR1, signature 594 617 IPR022340 -
Cma09g00372 741 PRINTS Putative plant GPCR, GCR1, signature 542 557 IPR022340 -
Cma09g00372 741 PRINTS Putative plant GPCR, GCR1, signature 504 517 IPR022340 -
Cma09g00372 741 PRINTS Putative plant GPCR, GCR1, signature 685 701 IPR022340 -
Cma09g00372 741 PRINTS Putative plant GPCR, GCR1, signature 519 537 IPR022340 -
Cma09g00372 741 PRINTS Putative plant GPCR, GCR1, signature 667 684 IPR022340 -
Cma09g00372 741 PRINTS Putative plant GPCR, GCR1, signature 441 456 IPR022340 -
Cma09g00372 741 PRINTS Putative plant GPCR, GCR1, signature 474 496 IPR022340 -
Cma09g00372 741 PRINTS Putative plant GPCR, GCR1, signature 581 593 IPR022340 -
Cma09g00372 741 PRINTS Putative plant GPCR, GCR1, signature 637 658 IPR022340 -
Cma09g00372 741 PRINTS Putative plant GPCR, GCR1, signature 458 472 IPR022340 -
Cma09g00372 741 PRINTS GCR1-cAMP receptor family signature 643 661 IPR022343 -
Cma09g00372 741 PRINTS GCR1-cAMP receptor family signature 502 520 IPR022343 -
Cma09g00372 741 PRINTS GCR1-cAMP receptor family signature 452 470 IPR022343 -
Cma09g00372 741 PRINTS GCR1-cAMP receptor family signature 471 486 IPR022343 -
Cma09g00372 741 PRINTS GCR1-cAMP receptor family signature 675 694 IPR022343 -
Cma09g00372 741 SUPERFAMILY Protein kinase-like (PK-like) 64 360 IPR011009 -
Cma09g00372 741 SMART serkin_6 86 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma09g00372 741 Gene3D Transferase(Phosphotransferase) domain 1 169 373 - -
Cma09g00372 741 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL12-RELATED 32 390 - -
Cma09g00372 741 ProSiteProfiles G-protein coupled receptors family 2 profile 2. 441 695 IPR017981 GO:0004888|GO:0007166|GO:0016021
Cma09g00372 741 ProSiteProfiles Protein kinase domain profile. 86 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma09g00372 741 MobiDBLite consensus disorder prediction 28 54 - -
Cma09g00372 741 SUPERFAMILY Family A G protein-coupled receptor-like 440 713 - -
Cma09g00372 741 Pfam Protein kinase domain 88 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma09g00372 741 Pfam Slime mold cyclic AMP receptor 444 695 - -
Cma09g00372 741 MobiDBLite consensus disorder prediction 40 54 - -
Cma09g00372 741 Gene3D Phosphorylase Kinase; domain 1 67 168 - -
Cma09g00372 741 Gene3D - 438 717 - -
Cma09g00372 741 PANTHER OS01G0588500 PROTEIN-RELATED 32 390 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g01606 Cma09g00372 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01697 Cma-Chr1:11551936 Cma09g00372 Cma-Chr9:1552313 0 dispersed
Cma09g00372 Cma-Chr9:1552313 Cma11g00733 Cma-Chr11:3588221 5.04E-159 dispersed
Cma01g01696 Cma-Chr1:11546565 Cma09g00372 Cma-Chr9:1552313 0 wgd
Cma17g00684 Cma-Chr17:5716380 Cma09g00372 Cma-Chr9:1552313 1.42E-80 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68788 PF00069 Pkinase 3.90E-45 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00372 K22987 - csv:101218136 739.569