Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g00224 ATGGCTAAGAAACACACCCGATTGCAGAGGTTGAGAGTTTCTCAATCGTCGGCTTGTTTCAAGGTCTGTTTCCAGCAGATTCGAACCAGACCCACCGGCGATTTGATTAAGACTTGTCAGAAGGAGGAGCTATTAGGGCATGGGGCGGATGAGTATTGCACGGACAGCGCGAAGTCTGTGGCTGAGATTGGTAATCGAATCATGGTTGTGGTTGATTCTAGTTTTGGGGGCAAAGGGGCTCTTGAATGGGCTTTGTCTCATGCTGTTCAAAATCAAGATTCTATTATTCTTCTTCATGTTGCCAAGTCTTCAAAACAAGGCGTTGTGTTTGATGAAATGCTTGACATGAAGGTTTATCAACTTCTTCTGTGTATGAAGAATATGTGCCAAATGAGAAGGCCAGGGGTTAAAGTGGAGATGGAATTCCTACAAGGGAAGGAGATGGGTCGTGTCATTGTGGAAGAAGCAAAGAAACAGCGAGTGTCTTTGCTGGTTCTTGGGCAAAGAAAGCAGTCACCATTCTGGTCACTGGTAAAGAAGTTCAGTACAAACAAGAGAAGGAGTCATGGCGGGATTGTGGAGTACTGCATCCAAAACTCTTCATGCCCGACCATTGCGGTGAGGAGGAAGAGCAAGAAACTAGGAGGCTGCCATTGCTTTTTGTGCGGAGGAAAACAAGATGGAAATTGTGAGGCTTCTGATATTATTCAATAA 714 45.1 MAKKHTRLQRLRVSQSSACFKVCFQQIRTRPTGDLIKTCQKEELLGHGADEYCTDSAKSVAEIGNRIMVVVDSSFGGKGALEWALSHAVQNQDSIILLHVAKSSKQGVVFDEMLDMKVYQLLLCMKNMCQMRRPGVKVEMEFLQGKEMGRVIVEEAKKQRVSLLVLGQRKQSPFWSLVKKFSTNKRRSHGGIVEYCIQNSSCPTIAVRRKSKKLGGCHCFLCGGKQDGNCEASDIIQ 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1122547 1126819 + CmaCh11G002240.1 Cma11g00224 302733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g00224 237 Pfam Universal stress protein family 66 208 IPR006016 -
Cma11g00224 237 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 216 - -
Cma11g00224 237 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 65 211 - -
Cma11g00224 237 Gene3D HUPs 64 216 IPR014729 -
Cma11g00224 237 CDD USP_Like 66 207 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma11g00224 Cma13g01058 CCT
Cma11g00224 Cma13g01058 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g01711 Cma-Chr4:8609437 Cma11g00224 Cma-Chr11:1122547 7.96E-50 dispersed
Cma11g00224 Cma-Chr11:1122547 Cma15g00682 Cma-Chr15:3263758 1.52E-14 dispersed
Cma13g01043 Cma-Chr13:7961352 Cma11g00224 Cma-Chr11:1122547 7.28E-07 dispersed
Cma11g00224 Cma-Chr11:1122547 Cma13g01058 Cma-Chr13:8032668 1.23E-55 wgd
Cma11g00224 Cma-Chr11:1122547 Cma18g01096 Cma-Chr18:8982094 1.75E-42 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g00224 - - cmax:111465801 431.795