Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01745 ATGGCTGTTCCTGAAAAGGATCCAAGAGAGGAAGTGATTCAGGCATGGTATATGGATTATACTGACGAAGACCAGAGGCTTCCCCATCACCTTGAGCCCAAGCAGTTTCTGTCCCTGCAACAACTGGACGAACTTGGAGTTCTGAGCTGGAGACTAGACGCAGACATATATGAAACAGATGAGGAATTGATGAAGATACGTCGTGATCGTAATTACTCCTACATGGACTTTTGTGAGGTCTGTCCAGAAAAGCTTCCTAATTATGAAGAGAAGATTAAAAGCTTTTATGAGGAACACCTTCACACCGATGAGGAGATCCGTTATTGTGTATCTGGGAGTGGTTATTTTGATGTTAGGGATCTGAATGACAAATGGATTCGCGTTTGGGTAAAGAAGGGAGCGATGATCGTGTTACCTGCTGGAATTTATCATCGATTTACTCTTGATTCTGGCAATTACATCAAGGCTATGCGACTCTTTGTTGGTGATCCTGTGTGGACTCCTCACAACCGTCCCAACGATCATCTTCCCGCAAGGAAGGAGTATCTGAAAAGTTTTGTGGAGAAGGAAGCTGGTAAGCAAGCCGTTGATGCTGCAGCATGA 603 44.44 MAVPEKDPREEVIQAWYMDYTDEDQRLPHHLEPKQFLSLQQLDELGVLSWRLDADIYETDEELMKIRRDRNYSYMDFCEVCPEKLPNYEEKIKSFYEEHLHTDEEIRYCVSGSGYFDVRDLNDKWIRVWVKKGAMIVLPAGIYHRFTLDSGNYIKAMRLFVGDPVWTPHNRPNDHLPARKEYLKSFVEKEAGKQAVDAAA 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12761925 12763490 + CmaCh14G017450.1 Cma14g01745 308728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01745 200 CDD cupin_ARD 39 168 IPR004313 GO:0010309
Cma14g01745 200 Gene3D Jelly Rolls 3 189 IPR014710 -
Cma14g01745 200 PANTHER 1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 1 6 198 - -
Cma14g01745 200 Pfam ARD/ARD' family 14 168 IPR004313 GO:0010309
Cma14g01745 200 SUPERFAMILY RmlC-like cupins 14 186 IPR011051 -
Cma14g01745 200 Hamap 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [ADI1]. 13 176 IPR027496 GO:0016491|GO:0019509
Cma14g01745 200 PANTHER ACIREDUCTONE DIOXYGENASE 6 198 IPR004313 GO:0010309
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma14g01745 Cma17g00207 CCT
Cma06g01371 Cma14g01745 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g01745 Cma-Chr14:12761925 Cma17g00207 Cma-Chr17:1073070 1.01E-86 wgd
Cma14g01745 Cma-Chr14:12761925 Cma06g01371 Cma-Chr6:8954752 1.04E-134 wgd
Cma14g01745 Cma-Chr14:12761925 Cma08g01124 Cma-Chr8:6953686 6.72E-06 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01745 K08967 - csv:101222292 388.267