Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00201 ATGGCAGCTCTTTCCAACAAATATGGCCCTCTAATGCTCCTAAAGCTTGGCCAGAAGCAAGCCCTCGTGGTTTCATCACCAAAAATGGCTAAAGAAGTGATGAAGACCCATGACATCAAATTCTCCAACAGGCCCCAAACTACTGCTGCACACGAATTGCTGTACCAATGTCAAGACATTGGCTTTGCTCAATATGGTGAGTACTGGAGACAAGCCAGAAAAGTGTGCGCTCTTGAGCTTTTTAGTGCCAAAAGAGTGGACTCTTTTCAGTACGTAAGGGATGAAGAAGTTGCTGATCTTTTTCCTTCTCTTTGGTGGATTGATATTATTAGAGGGTTCATTAAGGAGTTGAAAGATTGCTCCAAAACATTGGATACATTTGTTAGTAAAGTGGTTGAAGAACACAAGGCAAAGATAAGAGATGGTGTTCTAACTGATGAATCTAAGAAGGATTTTGTGGATATCATGTTGCAGCTCGAAGAGGACAACATGATTGACTATCATTTCTCTCTTCACAACCTCAAAGGAATGTTACTGCTCATCAAAAGCAAGAAACCCAACTTCCCTCCTTCACCACCAACGCTACCCATCATCGGCAACCTCCACCAATTAGGTGCCCTGCCACACCAATCCATGGCAGCTCTTTCTAACAAATATGGCCCTCTAATGCTCCTAAAGCTTGGCCAGAAGCAAGCCCTCGTGGTTTCATCACCAAAAATGGCTAAAGAAGTGATGAAGACCCATGACATCAAATTCTCCAACAGGCCCCAAACTACTGCCGCATACGAATTGCTGTACCAATGTCAAGACATTGGCTTTACTCAATATGGTGAGTATTGGAGACAAGCCAGGAAAGTGTGCGCTCTTGAGCTTTTTAGTGTCAAAAGAGTGGACTCCTTTCAGTACGTAAAGGATGATGAAGTTGGTGAGCTCATTGACAGGATTCGTAAGGCTTGTATGGGCGGTGAGGCTGTCAATCTAAGCCAGTTGTTTCTTCAAACATCGAACAATATAGTGTCGAGATGTGTTTTGGGAGAGAAATTTGAGGATGAAAATGGGAATAGTAGATTTGGAGACACAGCCAGAAAGCTCCAACGGGATGACATGTTTGACTATCATTTCTCACCGATCAACCTCAAAGCAATCGTACTGGACATGTTTGTTGGAGGATGTGACACAACAGCGACAGTACTAGAGTGGACAATGACAGAGCTGATGAGAAATCCAGCAGCCATGAAGAAAGTCCAAGAGGAAGTAAGGACAATAACAGGAAAGAAACCAAAGATCGAAGCTGAAGATATTCAAAAGATGGAGTACATGCACTGCGTCATAAATGAATCTCTGAGGCTCCACCCGCCAATTCCTCTGCTAGTGCCACGAGAAACAGCAACAGATGTGGAGATCGACGGCTACCATATTCCATCAAAGACAAGAGTTTTTGTGAACGCATGGAAAATCCAAAGGGATCCCGAAAATTGGCACAATCCAAACGAATTCATTCCAGAGAGGTTTATGGATGACAGTTCAGTGGATTACAAAGGCCAAGACTATGAGTTTATTCCATTTGGAAGTGGGAGAAGGAAGTGCCCAGGATTGTCATTTGGGGCTGCTTCATTTGAACATGCATTGGCTAATCTTCTCCCTTGGTTTGATTGGAAGCTTCCCAGTGACTGTGATCTGAGCGTCGAAGAAGAAAATGGGCTCACTGTTCGCAAGAAAACCCCCCTCCTCCTTAATCCAATGCCATGTCTCTAA 1755 43.82 MAALSNKYGPLMLLKLGQKQALVVSSPKMAKEVMKTHDIKFSNRPQTTAAHELLYQCQDIGFAQYGEYWRQARKVCALELFSAKRVDSFQYVRDEEVADLFPSLWWIDIIRGFIKELKDCSKTLDTFVSKVVEEHKAKIRDGVLTDESKKDFVDIMLQLEEDNMIDYHFSLHNLKGMLLLIKSKKPNFPPSPPTLPIIGNLHQLGALPHQSMAALSNKYGPLMLLKLGQKQALVVSSPKMAKEVMKTHDIKFSNRPQTTAAYELLYQCQDIGFTQYGEYWRQARKVCALELFSVKRVDSFQYVKDDEVGELIDRIRKACMGGEAVNLSQLFLQTSNNIVSRCVLGEKFEDENGNSRFGDTARKLQRDDMFDYHFSPINLKAIVLDMFVGGCDTTATVLEWTMTELMRNPAAMKKVQEEVRTITGKKPKIEAEDIQKMEYMHCVINESLRLHPPIPLLVPRETATDVEIDGYHIPSKTRVFVNAWKIQRDPENWHNPNEFIPERFMDDSSVDYKGQDYEFIPFGSGRRKCPGLSFGAASFEHALANLLPWFDWKLPSDCDLSVEEENGLTVRKKTPLLLNPMPCL 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1084997 1088972 - CmaCh18G002010.1 Cma18g00201 313539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00201 584 SUPERFAMILY Cytochrome P450 2 179 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00201 584 Pfam Cytochrome P450 373 574 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00201 584 Pfam Cytochrome P450 2 100 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00201 584 Pfam Cytochrome P450 189 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00201 584 Gene3D Cytochrome P450 97 180 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00201 584 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 178 366 - -
Cma18g00201 584 PANTHER CYTOCHROME P450 71B11-RELATED 364 582 - -
Cma18g00201 584 PANTHER CYTOCHROME P450 71B11-RELATED 97 179 - -
Cma18g00201 584 PANTHER CYTOCHROME P450 71B11-RELATED 2 100 - -
Cma18g00201 584 Gene3D Cytochrome P450 364 577 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00201 584 SUPERFAMILY Cytochrome P450 189 581 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00201 584 PRINTS E-class P450 group I signature 482 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00201 584 PRINTS E-class P450 group I signature 29 50 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00201 584 PRINTS E-class P450 group I signature 519 529 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00201 584 PRINTS E-class P450 group I signature 5 24 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00201 584 PRINTS E-class P450 group I signature 441 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00201 584 PRINTS E-class P450 group I signature 529 552 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00201 584 PANTHER CYTOCHROME P450 71B11-RELATED 178 366 - -
Cma18g00201 584 Gene3D Cytochrome P450 1 96 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00201 584 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 522 531 IPR017972 GO:0005506|GO:0016705
Cma18g00201 584 Gene3D Cytochrome P450 181 363 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00201 584 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 364 582 - -
Cma18g00201 584 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 2 100 - -
Cma18g00201 584 PRINTS P450 superfamily signature 520 529 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00201 584 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00201 584 PRINTS P450 superfamily signature 389 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00201 584 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 97 179 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00089 Cma18g00201 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma18g00201 Cma-Chr18:1084997 Cma14g01195 Cma-Chr14:9549364 1.34E-07 dispersed
Cma18g00200 Cma-Chr18:1079299 Cma18g00201 Cma-Chr18:1084997 2.23E-34 tandem
Cma18g00201 Cma-Chr18:1084997 Cma18g00743 Cma-Chr18:6688579 1.71E-17 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00201 - K20617 cic:CICLE_v10024390mg 445.662