Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00295 ATGGATCGGAGGAGACCTGCTAGTCCACTCTCCGCCCGGCAGTGGAGTGGTGGCTCGAGCAGCCCGGGATCATCTTCTCCGGCTCATCCTCACGCTCTATTGGGTTCGAATTCCACCATCAAGCGCGCTCAGAATGTTGCCGCCAAGAAGGCTGCTCAACGTTTGGCTGAGGCTATGGCCAACACGCGGCCGCCCGTGGAGGGCGACGATGAAGATGAAGATGAAGAGGATGATCTCAACTTCCGATTCCGTGCTCCTTTTCCTCCTCCTAGTCACTCGTCTTATCCCAGTGCTGTGAACAGTAACAATTCCAATTCGTTTCATACGATTTCAGGTCCCAGGATTAACAGATCTCCGTCTCCCGCGTTAGATCGTAATTTCGTAGAGCATGTTCCTCAAGTTCGATCCACATCAACTGGTAGATCATCGAGGTCCGTGCGTTCGAGCCAGATCGTTCCACCAAGTAAACCTCCACCCAGAACTCCAGTCTTCATTCCTCCAATTGAACCTCCTTCTAATAGGATTGGAGATAGAAGGTTTACATCAGATATCGGACAGGTCAACTCCAAAGATGCAGGGGATCAGTCCGAAGCTTCTGCACTACGTGATGAGCTTGATATGCTACAAGAAGAGAACGAGAATATACTTGGAAAGCTTCGAGAAGTAGAAGAAAAACGGGAAGAGGCAGAGGCTAGAGCTAGAATGCTAGAGAAACAGGTTGCTACTCTTGGAGAGGGTGTATCTTTGGAAGCCAAATTATTAAGCAGGAAAGAAGCAAAACTCCGTCAAAGAGAGGCTGCACTCAAGGCTGCAATACCAACCAAGGATAGTAGAAACGAAGAAATTGCTGCCCTTCGTTCAGAAATTGAGAACTTAAAAGATGAGTCATCAGCAGCTACAGAACAACTCCGAGAAGCAGAGTCTGAAGCAAAGGCTCTTCGTGTAATGACACAAAGAATGATTTTGACACAAGAGGAGATGGAAGAGGTTGTTTTGAAGAGGTGTTGGCTTGCTCGCTACTGGGGCTTAGCTGTTCAATATGGCATATGTGCGGATATTGCACTCTCAAAACATGAGTATTGGTCTTCTTTAGCTCCTTTGCCATTCGAAGTTGTTACTTCTGCTGGACAAAAGGCTAAGGAGGAGCCTGAAGGTCGAAATGATCAAGATAGGAGTAAGCTCATCCAGGATTTAAATGATCTCTCTGGTGAAGGAAATATTGAGAGTATGCTTTCAGTTGAAATGGGATTGAGAGAACTAGCATCTCTAAAGGTTGAAGATGCAATTGTGCTTGCATTGGCACAACATAGATATCCAAGTTTGATCCATCAATCAGATTCAAAATCACATGCTGATCGGAAGTTTACCGAGGCTTTTGAACTAAGTGAAGCTGAAGCTGAAGATATTCATTTTAAGGAGACATATGGTGTGGATGAGGATGTTGCAGATGAGCGGCTTCAGTTTTGGATCAGTCGTAGTGGACAGCCTCCGACTTCACATGATGCTGTCGATGTCGAACGAGGTCTTGTAGAGCTCAGAAAGCTTGGAATAGAACAACTGCTTTGGGAGGCATCTAGAAAGGAAATCGACCAATCTTCTGCAAGGGAATTAGACACCTAA 1620 46.11 MDRRRPASPLSARQWSGGSSSPGSSSPAHPHALLGSNSTIKRAQNVAAKKAAQRLAEAMANTRPPVEGDDEDEDEEDDLNFRFRAPFPPPSHSSYPSAVNSNNSNSFHTISGPRINRSPSPALDRNFVEHVPQVRSTSTGRSSRSVRSSQIVPPSKPPPRTPVFIPPIEPPSNRIGDRRFTSDIGQVNSKDAGDQSEASALRDELDMLQEENENILGKLREVEEKREEAEARARMLEKQVATLGEGVSLEAKLLSRKEAKLRQREAALKAAIPTKDSRNEEIAALRSEIENLKDESSAATEQLREAESEAKALRVMTQRMILTQEEMEEVVLKRCWLARYWGLAVQYGICADIALSKHEYWSSLAPLPFEVVTSAGQKAKEEPEGRNDQDRSKLIQDLNDLSGEGNIESMLSVEMGLRELASLKVEDAIVLALAQHRYPSLIHQSDSKSHADRKFTEAFELSEAEAEDIHFKETYGVDEDVADERLQFWISRSGQPPTSHDAVDVERGLVELRKLGIEQLLWEASRKEIDQSSARELDT 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1562799 1570390 - CmaCh18G002950.1 Cma18g00295 313633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00295 539 MobiDBLite consensus disorder prediction 152 169 - -
Cma18g00295 539 MobiDBLite consensus disorder prediction 94 116 - -
Cma18g00295 539 MobiDBLite consensus disorder prediction 131 151 - -
Cma18g00295 539 MobiDBLite consensus disorder prediction 12 44 - -
Cma18g00295 539 Coils Coil 275 316 - -
Cma18g00295 539 MobiDBLite consensus disorder prediction 1 198 - -
Cma18g00295 539 Coils Coil 198 246 - -
Cma18g00295 539 PANTHER FAS-BINDING FACTOR-LIKE PROTEIN 1 533 IPR040321 GO:0000911
Cma18g00295 539 PANTHER MYOSIN 1 533 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma13g00829 Cma18g00295 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma17g01405 Cma-Chr17:9299733 Cma18g00295 Cma-Chr18:1562799 1.90E-162 dispersed
Cma18g00295 Cma-Chr18:1562799 Cma13g00829 Cma-Chr13:6934779 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00295 - - csv:101221393 808.52