Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00746 ATGTTGGAAAGACCTAGAAGAGTTTCTTCAAGAGAGATTTTGCAGGGAGCTCCATTGATTACAAAGGACTACATTTTGAGTTCTTGCCATTTGGGGGTGGTCGGAGGATATGCTCGGGGTTGGACATGGGAGGTGAAATCTGTGGATTTGGCTTTTGCAAATCTCTTGTACCATTTTGATTGGAAGTTGCCGGAGGGGATGAAGGAGGAGGACTTGGACATGGAAGAGAAATTAGATTATTTTTTACTTTTCAAAAGTTTTCACCCTACAGTGATGACTGACGAGAGATGTGCAAAATTTTGGTTTGAAGGGGATGGATTTCATGAGCATATAAGTCAAGTTCCTGTTGTAGGAGAGCTTTACGGTCCTATTATGAGCCTCAACCTAGGTCGTATAGAAACCATCATCATATCATCGACTGAAACTGCTCGTGCCCTCTTGAAAACTCACGATCTTCAAAGTTGCAACAGACCACAAACTCATGCTATGAAAAAATTCACTTACAATTTTCTTGACCTTGGTTTTTCACCCTACAATGATTACTTGCGAGAGATGCGCAAAATTTCTTCTTGTGGAGCTATTGTTGATCTTAGTGAGAAGTCCATTGCTCTCACTACTGGTGTTATTTTTAGAATTGCATTTGGGAAGCCATTTGAAGGGGATGGATTTCATGAGCTTATAAGTGAAGTTGAAGCCCTGATGGGAAGCTATAGTGCTTCTGAGTTTTTTCCAGTTCCTTTTGTGGGAGAAGTATTTGATTGGTTTAGTGGTCGAGAAGCTAGAATTGAGAAAGTTTTTAATGAGATAAATGCTCTATTTCAAAAGGTGATTGATGAACACCTCTGTCCTGAGAGGCCTAAGCCAGAGCAAGATGATATCATTGATGTGCTTTTGGCTATTGGTAAAAAGCAAGTTCATCCTCACACGGTTGTTATTAACCATGAAAACATCAAAGCCATTCTTTTTAACATATTTGTTGCAGGATTAGACACTGGTTCAATTACAATAGTCTGGGCAATGGCAGAACTCGCAAAAAATGCAAAATTGATGAAGAAAGCTCAAGAAGAAATAAGAAACTATGTGAGAAACAAACAAAAGGTAAGAGAGAAAGACGTCGAAGAGCTTCCATATTTAAAAATGATAGTAAAAGAGACACTAAGACTACATCCACCAGCACCTCTTCTCCTTCCAAGAGAAACCATTTCTCATTTCAAAATTGAAGACTATGATTTTTACCCGAAAACGAAGGTTCAAGTAAATATTTGGGCAATTGGACGAGACCCCACATACTGGACAGACCCAGAAGAGTTCCTTCCAGAGAGATTTGCAGAGAGCTCGGTTGATTACAAAGGACAACATTATGAGTTCTTACCATTTGGGGCTGGTCGGAGAATATGCCCGGGGTTGAATATGGGAGTAAAAACTGTGGAGTTAGCTTTAGCGAATCTTTTGTATCATTTTGATTGGAAGCTTCCGAATGGGATGAAAGAGGAAGAGTTGGATATGGAAGAGAGTTCAGGTTTGAGTCTCACCATCTACAAAAAGTTGCCTCTAAAGCTTGTACCAATTTTATACCATCCATGA 1584 39.65 MLERPRRVSSREILQGAPLITKDYILSSCHLGVVGGYARGWTWEVKSVDLAFANLLYHFDWKLPEGMKEEDLDMEEKLDYFLLFKSFHPTVMTDERCAKFWFEGDGFHEHISQVPVVGELYGPIMSLNLGRIETIIISSTETARALLKTHDLQSCNRPQTHAMKKFTYNFLDLGFSPYNDYLREMRKISSCGAIVDLSEKSIALTTGVIFRIAFGKPFEGDGFHELISEVEALMGSYSASEFFPVPFVGEVFDWFSGREARIEKVFNEINALFQKVIDEHLCPERPKPEQDDIIDVLLAIGKKQVHPHTVVINHENIKAILFNIFVAGLDTGSITIVWAMAELAKNAKLMKKAQEEIRNYVRNKQKVREKDVEELPYLKMIVKETLRLHPPAPLLLPRETISHFKIEDYDFYPKTKVQVNIWAIGRDPTYWTDPEEFLPERFAESSVDYKGQHYEFLPFGAGRRICPGLNMGVKTVELALANLLYHFDWKLPNGMKEEELDMEESSGLSLTIYKKLPLKLVPILYHP 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6699586 6704953 - CmaCh18G007460.1 Cma18g00746 314084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00746 527 PRINTS E-class P450 group I signature 118 137 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00746 527 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00746 527 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00746 527 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00746 527 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00746 527 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00746 527 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00746 527 PANTHER CYTOCHROME P450 128 189 - -
Cma18g00746 527 PANTHER CYTOCHROME P450 190 524 - -
Cma18g00746 527 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00746 527 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00746 527 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00746 527 PANTHER CYTOCHROME P450 71B11-RELATED 128 189 - -
Cma18g00746 527 Pfam Cytochrome P450 182 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00746 527 SUPERFAMILY Cytochrome P450 119 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00746 527 Coils Coil 343 370 - -
Cma18g00746 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Cma18g00746 527 PANTHER CYTOCHROME P450 71B11-RELATED 43 82 - -
Cma18g00746 527 PANTHER CYTOCHROME P450 71B11-RELATED 190 524 - -
Cma18g00746 527 PANTHER CYTOCHROME P450 43 82 - -
Cma18g00746 527 Gene3D Cytochrome P450 108 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g01782 Cma18g00746 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma18g00740 Cma-Chr18:6668392 Cma18g00746 Cma-Chr18:6699586 2.33E-139 dispersed
Cma18g00746 Cma-Chr18:6699586 Cma18g00748 Cma-Chr18:6718521 3.02E-10 dispersed
Cma18g00745 Cma-Chr18:6696086 Cma18g00746 Cma-Chr18:6699586 5.21E-58 tandem
Cma18g00746 Cma-Chr18:6699586 Cma18g00747 Cma-Chr18:6709254 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00746 - K01773 cmos:111449354 631.328