Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g01906 ATGGGTCTTTTTATTTGGGTCTCCTCCTTCATTTTAGTAGCTACCCTTTTAAGCAAATGCTCTTTTTCTCTCACTGAAGATGGTTTAACATTGTTGGAAATCAAAAGTACTTTAAATGACACTAAGAACGTCCTCAGTAATTGGAGCCCTACAGATGAAACTCCCTGTAAATGGACTGGTATCTCTTGCCATCCTGAGGACTCTCGTGTCAGCTCGGTGGCTCTCCACCAGAACGGCTTACATGGATATATCCCCAATGAACTTGCCAATTGTTCTGAACTTAGAGCTCTGTACTTGAGGGCTAATTATCTTCAAGGAGGCATTCCATCAAATATTGGAAACCTTTCATACCTTACCATACTTGATTTATCTTGCAATTCCTTTAAGGGTAGTATACCATCATCAATTGGTCGTCTTACACACTTGCGGAATCTATTCTTTGGTAATCAAGGTCTTTGTGGTCGACAAGTGAACAAGCCGTGCCGGACTTCACTGGGTTTTCCTGTCGTCTTACCACATGCTGAAATTCCTCCTAAGCGATCCTCTCATTACACCAAAGGACTGTTGATTGGTGCAATATCAACAGCAGGGTTTGTGTTGGTCATACTTATTGTATTCACGTGGACTCGTCTGGTGTCGAAGAAAGAAAGAACTGCAAAGAGTTACATGGAAGTTAAGAAGCAAAAAAGTCGTGATACAAGTGCAAAGCTTATTACATTCCATGGGGATCTACTATATCCAACATGTGAGATCATAGAAAAGCTGGAGGCCCTGAATGAAACAAATGTTGTTGGCTCAGGAGGTCTTGGAACTGTGTATCGAATGGTCATGAATGATTCCGGAGCTTTTGCTGTGAAGAAAATTGATAGGACTCAAGACGGTCCAGACCAAGTAGTTGAAAGAGAATTGGAGATACTGGGTAGCATTAAACACATAAATTTAGTGAAATTGCGTGAACGTGGACCAGAACAGTCATTGGATTGGAGTGCTCGGTTAAACATAGCGTTAGGCTCCGCTCGAGGACTGGCGTACTTACACCACGATTGCTGTCCAAAGATTGTGCACTGCAACATAAAATCCAGCAACATTCTTCTTGACGAGAACTTAGAGCCGCACGTATCTGACTTTGGTCTTGCAAAGCTTTCGGTTGATGGGGATTCCCATGTCACAACTGTTGTTGCTGGCACATTTGGTTATTTGGCTCCAGAATACTTAGAAAGTGGGATAGGAACTGAGAAGTCTGATGTTTATAGCTTTGGAGTTCTCTTGCTGGAGCTTGTAACAGGAAAGAGACCAAGTGATCCATTTTTCTCGAAGAGGGGTGTAAATATTGTTGGTTGGTTGAACACCTTGCGGGGAGAAGACCAATTGGAGAACATAGTCGATAATAGGTGCAAGAATGCAGATGTCGAAACGGTAGAAGCGATTCTCGAAATAGCAGCGAGGTGCACCAATGGCAACCCAACTATGCGGCCTACAATGAACCAAGTACTGCAGCAGCTAGAGCAAGAGGTGATGTCGCCGTATCCGAGTGATTACTCTGAATCTCACTCGGATTATTCATGA 1566 43.1 MGLFIWVSSFILVATLLSKCSFSLTEDGLTLLEIKSTLNDTKNVLSNWSPTDETPCKWTGISCHPEDSRVSSVALHQNGLHGYIPNELANCSELRALYLRANYLQGGIPSNIGNLSYLTILDLSCNSFKGSIPSSIGRLTHLRNLFFGNQGLCGRQVNKPCRTSLGFPVVLPHAEIPPKRSSHYTKGLLIGAISTAGFVLVILIVFTWTRLVSKKERTAKSYMEVKKQKSRDTSAKLITFHGDLLYPTCEIIEKLEALNETNVVGSGGLGTVYRMVMNDSGAFAVKKIDRTQDGPDQVVERELEILGSIKHINLVKLRERGPEQSLDWSARLNIALGSARGLAYLHHDCCPKIVHCNIKSSNILLDENLEPHVSDFGLAKLSVDGDSHVTTVVAGTFGYLAPEYLESGIGTEKSDVYSFGVLLLELVTGKRPSDPFFSKRGVNIVGWLNTLRGEDQLENIVDNRCKNADVETVEAILEIAARCTNGNPTMRPTMNQVLQQLEQEVMSPYPSDYSESHSDYS 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 25503751 25508051 - MELO3C017153.2.1 Cme02g01906 321795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g01906 521 Gene3D Transferase(Phosphotransferase) domain 1 316 513 - -
Cme02g01906 521 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Cme02g01906 521 Pfam Protein kinase domain 333 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g01906 521 SUPERFAMILY Protein kinase-like (PK-like) 237 502 IPR011009 -
Cme02g01906 521 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 146 321 - -
Cme02g01906 521 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 35 75 - -
Cme02g01906 521 Gene3D Phosphorylase Kinase; domain 1 217 315 - -
Cme02g01906 521 SUPERFAMILY L domain-like 25 154 - -
Cme02g01906 521 PANTHER REPEAT FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 146 321 - -
Cme02g01906 521 PANTHER REPEAT FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 73 145 - -
Cme02g01906 521 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 73 145 - -
Cme02g01906 521 ProSiteProfiles Protein kinase domain profile. 258 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g01906 521 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 324 513 - -
Cme02g01906 521 Gene3D Ribonuclease Inhibitor 25 165 IPR032675 -
Cme02g01906 521 PANTHER REPEAT FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 324 513 - -
Cme02g01906 521 PANTHER REPEAT FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 35 75 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme02g01906 Cme12g01746 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01906 Cme-Chr2:25503751 Cme07g00770 Cme-Chr7:7071782 8.43E-154 dispersed
Cme12g01746 Cme-Chr12:24175729 Cme02g01906 Cme-Chr2:25503751 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64708 PF00069 Pkinase 1.90E-26 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g01906 - - csv:101217728 983.4