Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01049 ATGGCTCCATCTAGCAAAGCTGACAAGAAAGCGGCTGTAGATGCAGCCGCGTGGATGTTTAACGTTGTAACTTCTGTTGGAATTATAATCGTGAATAAGGCTCTCATGGCTACCTATGGCTTCAGCTTTGCCACAACTTTAACAGGTTTGCATTTTGCGACAACCACCTTGATGACTGTCATTCTAAGGTGGCTTGGTTATATTCAAGCATCCCATCTCCCTCTACCAGAGCTTCTAAAATTTGTACTATTTGCCAACTTTTCCATTGTTGGAATGAATGTCAGCCTGATGTGGAATTCAGTGGGATTTTATCAGATTGCAAAGCTAAGTATGATTCCTGTCTCTTGCTTGTTGGAAGTCGTCTTGGACAAGATTCGGTACTCCAGAGATACGAAGTTGAGCATTGCAGTTGTTCTCTTAGGTGTTGGAGTATGCACTGTTACTGATGTCAGTGTTAATACCAGAGGCTTTGTTGCAGCCGTTATCGCCGTGTGGAGCACTTCTCTGCAGCAATACTATGTGCATTTCCTCCAACGGAAGTATTCGCTGAGTTCCTTCAACTTGTTAGGACATACGGCTCCAGCACAGGCCGGCTCCCTTCTATTGGTCGGACCTTTTCTCGACTACTGGTTGACGAACAAAAGGGTAGATCGATATGACTACAATTTAGCCTCTATTATTTTCATAATTCTGTCATGCTCCATTGCTGTGGGAACCAATCTTAGCCAATTTATCTGCATAGGCAGATTCACAGCTGTTTCATTCCAAGTTCTTGGCCACATGAAAACAATCCTTGTTTTGATCATGGGATTCTTCTTCTTTGGAAAGGAAGGGCTTAACATGCAGGTGGTTTTGGGTATGATCATAGCGGTCATCGGGATGATTTGGTACGGTAATGCCTCGTCGAAACCCGGTGGAAAAGAACGTCGGAGCCACACGCTCCCAACAGCTAGACAACAAAAACATGGTGGTTTAACAGATTCTACCGAACATGATGGGAAGGTCTAA 1008 44.15 MAPSSKADKKAAVDAAAWMFNVVTSVGIIIVNKALMATYGFSFATTLTGLHFATTTLMTVILRWLGYIQASHLPLPELLKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEVVLDKIRYSRDTKLSIAVVLLGVGVCTVTDVSVNTRGFVAAVIAVWSTSLQQYYVHFLQRKYSLSSFNLLGHTAPAQAGSLLLVGPFLDYWLTNKRVDRYDYNLASIIFIILSCSIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLIMGFFFFGKEGLNMQVVLGMIIAVIGMIWYGNASSKPGGKERRSHTLPTARQQKHGGLTDSTEHDGKV 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 19742186 19747174 + MELO3C019980.2.1 Cme03g01049 323060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01049 335 PANTHER SOLUTE CARRIER FAMILY 35 7 314 - -
Cme03g01049 335 MobiDBLite consensus disorder prediction 302 335 - -
Cme03g01049 335 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
Cme03g01049 335 PANTHER - 7 314 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme03g01049 Cme10g01458 CCT
Cme03g01049 Cme10g01458 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01049 Cme-Chr3:19742186 Cme08g00468 Cme-Chr8:2861349 0 dispersed
Cme03g01049 Cme-Chr3:19742186 Cme09g01686 Cme-Chr9:21540286 2.29E-09 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01049 - - csv:101221215 627.476