Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01505 ATGGCTCGACTTGTCATTCTCTTTGCTCTCATTATGCTTCCTGCTCTCGCCGTCGCTAGCCGCCCCGTCAGAACTCCGTTTGTTGTTCGTGGTAAAGTTTTCTGTGATACTTGCCTTGCCGGCTTTGAAACCTCCGCTACTACCTACATTCCCGGTGCTAAGGTCAGAATTGAATGCAAGGACAGGAACTCCATGGAAGTTCGATACACTCATGAGGCCACAACAGATTCCACCGGTTCTTACACGCTCTTAGTCAGTGAGGACCATGGTGACGAACTTTGTGATGCCGTACTAGTCAGCAGCCCTCAGGAGAAATGTTCGTCAGTAGCAGAAGGCCGTGACCGTGCCCGTGTGATCCTGACCCGTTACAATGGTATTGCCTCAAACGACCGTTATGTGAATGCCATGGGTTTTGCGATAGACGAACCTATGTCTGGGTGCAACCAAGTGATGAGTCAGTACCAGGACATTGAAGATTAG 480 50.0 MARLVILFALIMLPALAVASRPVRTPFVVRGKVFCDTCLAGFETSATTYIPGAKVRIECKDRNSMEVRYTHEATTDSTGSYTLLVSEDHGDELCDAVLVSSPQEKCSSVAEGRDRARVILTRYNGIASNDRYVNAMGFAIDEPMSGCNQVMSQYQDIED 159
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 24293859 24296240 + MELO3C011368.2.1 Cme03g01505 323516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01505 159 PANTHER ALLERGEN-LIKE PROTEIN BRSN20 1 158 - -
Cme03g01505 159 Pfam Pollen protein Ole e 1 like 29 111 - -
Cme03g01505 159 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 1 158 IPR006041 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme03g01505 Cme07g00859 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01505 Cme-Chr3:24293859 Cme07g01756 Cme-Chr7:23064784 1.02E-44 dispersed
Cme03g01505 Cme-Chr3:24293859 Cme11g02347 Cme-Chr11:30487941 3.97E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01505 - - csv:101211620 308.916