Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01706 ATGGCAGGGCCTGATTACAAAGCCAATCAAGACAAGGATGATTTTCTGCAGCTTTTGGCAGCTCTTGGAGTTGATTTCCTTCTCTCTGGTGAAGAAAAGGTATCCCCAATATCATGTGCAGGGAAGATGATTTGCCTATTCTTTTCTGCAAACTGGTGTAGACCTTGTAGGACTTTCACTCCACAGTTGGTTCAACTCTACAACACTTTGCAAAAGAGAGGTGAAAAGCTAGAGATAATCTTCATCTCTTTGGACCATGACAAAAATGAATTTGAACAATACTTCAAGACTATGCCATGGCTTGCTGTGCCGTTGAACACCGAGTTGCAGAAACAGTTGTGCGGCAAGTACCATGTTGATTGCATTCCATCGTTTATTCCGCTTTGCGGAGATCATATTTTGAAAGAAGATGACTTGATTGGCTTCATTGAAGATTATGGTGCTGAAGTATTTCCTTTTACAAGGAAAAGGATGCAGGAACTTAAGGCCATGGATTGTGCCAAACGTGTAGAAGGAAGACTTGAAGAACTCTTTGGGAACAGAGGATATAACTATGTTATTTCTAGTCATGGAGGCAAGACACAAATATCTCAGCTAGTTGGAAAGACAATAGGCCTTTATTTTGGAGCATATTGGAGCCCTCCAAGTCGTTCCTTCACAGCCAAACTATCTAAAGTATACAAAGAAATCATGGACAAAACAGAGAATCATCACTCCTTAGAAGTAATCTTCGTCTCCACGGACCGAAACCTCGACGAATTCAAACTCAACATAATGGACATGCCATGGCTCGCTATCCCTTACGAGGATGAGACCCGGGGAGACCTCTACAGGATCTTCGACGTGAAGGCAATCCCAACACTAGTCCTGATCGGGGCAGATGGAAAGACGTCGAGTGAAAACGGAAGAGGCTTGGTTTGCTTGTATGGAGCAGAGGCATTCCCATTTACAGAAGAAAGAATATATGAGTTGGAAACAGCAGTGAAAAAGGAAGGAGAAGAATTGCCTTCAAATGTGGAGGATATAAAACACGAACATGTTCTTAAATTGGAGTTTGCAAAAGCCTATGTTTGTGATTTTTGCAAACTACAAGGAAGGTTTTGGGCATTTTCTTGTCATGTTTGTGATTATGATCTTCATCCAACTTGTGTTCAGCTCACAAATAATGTATAA 1173 41.43 MAGPDYKANQDKDDFLQLLAALGVDFLLSGEEKVSPISCAGKMICLFFSANWCRPCRTFTPQLVQLYNTLQKRGEKLEIIFISLDHDKNEFEQYFKTMPWLAVPLNTELQKQLCGKYHVDCIPSFIPLCGDHILKEDDLIGFIEDYGAEVFPFTRKRMQELKAMDCAKRVEGRLEELFGNRGYNYVISSHGGKTQISQLVGKTIGLYFGAYWSPPSRSFTAKLSKVYKEIMDKTENHHSLEVIFVSTDRNLDEFKLNIMDMPWLAIPYEDETRGDLYRIFDVKAIPTLVLIGADGKTSSENGRGLVCLYGAEAFPFTEERIYELETAVKKEGEELPSNVEDIKHEHVLKLEFAKAYVCDFCKLQGRFWAFSCHVCDYDLHPTCVQLTNNV 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 25705404 25707408 - MELO3C011177.2.1 Cme03g01706 323717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01706 390 PANTHER THIOREDOXIN 3 388 - -
Cme03g01706 390 SUPERFAMILY Thioredoxin-like 186 297 IPR036249 -
Cme03g01706 390 Gene3D Glutaredoxin 21 157 - -
Cme03g01706 390 SUPERFAMILY Cysteine-rich domain 337 386 IPR046349 -
Cme03g01706 390 SUPERFAMILY Thioredoxin-like 30 145 IPR036249 -
Cme03g01706 390 Pfam Thioredoxin-like 41 126 IPR012336 -
Cme03g01706 390 Pfam Thioredoxin-like 201 296 IPR012336 -
Cme03g01706 390 PANTHER NUCLEOREDOXIN 3-RELATED 3 388 - -
Cme03g01706 390 ProSiteProfiles Thioredoxin domain profile. 1 169 IPR013766 -
Cme03g01706 390 Gene3D Glutaredoxin 179 318 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme03g01706 Cme04g00320 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01706 Cme-Chr3:25705404 Cme09g00105 Cme-Chr9:799922 8.58E-65 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01706 K17609 - csv:101207967 784.252