Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00320 ATGTGGTTACCAAGATATAGCTTAGAAAGAAAAGAGAAATTGAATGTAAATGGATTTGTGGCAGTGGCAATTGATAAAGATAAAGGAAGCCAAGGAGCTCTCAAATGGGCAATTGATCATCTGCTTCAAAGAGGACATACTGTTTTCCTCATTCATGTCAAACTCAAATCTCCTTCTAATTCTACCCAAAAGATGAAACCTGATCCAGAAGCAAGTGTTAAAGATCTATTCCTTCCTTTTCGATGCTTTTGTACTCGAAAAGATATTCAATGCAAAGATGTTGTGTTGGAAGATACAGATGTAGCAAAGGCCATAATTGAATATGCTGCAAATACAACCATAGAGAATATTGTTGTGGGTGCTTCAGCCAAATCTGGCTTCTTAAGATTCAAGGCAACTGATGTTCCTGGCAGTATAGTAAAAGGAGCACCAGATTTTTGTAATGTGTTTGTCATTTCTAAAGGCAAAATTCAATCGATGCGTTCGGCATCTCGTCCTGCTCCAACGGTTGGTGCTCTACGAGGTCAACTAGCACAACAATGCAGCACAAAATCCGATACACCCGACTTCCCTGTCTCTCACTCTGCAAGTGCAAGAGTGTCTTTGGATAAGCCACCTCTTGATCTGCCTAATAAATCGCAAGACGAAGCCGATTTCATGAGGGAGAGTGATGAGAAAAAATGTGTTGGAAGCAGGTCCCCATTCACAAGGAAAGGATATAACTACAAACCATCATATGGAGATTTGCCGATGCAAGATTCAGATATATCTTTCGTTAGCTCGGGAAGACCGAGCATCGATCGTATATTTCCGACACTTTATGAGAGTCAAGATATGGTAGGAAGAGCCACACCACCACAGATTTCAAGCAGTACAGATCTTGACTTGACTCGCAGCTTTGAGTCTCTGCAGTTGGGACGAATGTCGTTGGATATGAACTTTCCGTCCGAGTTCTCATCCATCTCGCAAGATAGCGACAGATTGTCTATCTCCTCGCAGTCTATGGAAGACGTAGAGGCTGAGATGCGCAGACTGAAGCTAGAACTTAAGCAAACCATGGAAATGTACAGTACAGCCTGCAAGGAAGCTCTTACAGCAAAACAAAAGGCGGTCGAGTTACAACGCTGGAAATTGGAAGAAGAACAAAGATTAGAAGAGGCGAGATTGGCGGGGGAAGCTGCATTGGCACTAGCCGAACAAGAGAAGGCCAAGTCGAAAGCAGCCGTCGAAGCAGCTGAAGCAGCAAGAAGAATTGCAGAATTAGAAGCACAGAAAAGAATGAAGGCTGAAATGAAAGCACTCAAAGAAGCTGAAGAGAAGAAAAAGGCATTTGATGCATTGGCACAAACAGATAATATCAGGTATAGAAAGTATACGATCGAGGAGATCGAAGCAGCAACAGAATTCTTCTCCGAATCCCGTAGGATTGGAGAAGGAGGGTATGGTCCTGTTTACAAGTGTGATCTTGATCATACTCCTGTTGCCATTAAGGTTCTACGTCCCGATGCGACTCAAGGACGATCACAGTTTAAACAAGAGGTAGAAGTACTCAGCTGTATACGCCATCCAAACATGGTTCTCCTCCTCGGAGCTTGCCCCGAGTACGGCTGCTTGGTGTATGAGTTCATGGCTAATGGAAGCTTAGAAGACCGGCTTCTACGACGAGGAAACACGCCTCCACTTTCGTGGCAACTAAGGTTTAAAATTGCAGCTGAAATTGGAACAGCATTGTTGTTCTTGCACCAAACAAAGCCAGAGCCTCTTGTGCATCGTGATCTGAAACCAGCTAACATCCTTCTTGATCGTAACTTCGTCAGTAAGATCAGTGATGTTGGGTTGGCTCGGCTTGTACCACCATCGATTGCTGATAGCGTAACACAATACCGAATGACATCAACTGCTGGAACATTTTGCTACATTGATCCAGAGTATCAACAAACAGGTATGCTTGGTGTGAAATCGGACATATACTCGCTAGGCATCATGTTTCTCCAATTGATAACTTCTAGGCCACCAATGGGATTGACTCACCATGTCGAAAGAGCTATCGAGAAGGGTATGTTCGAAACTATTCTCGATCCAGCCATCACTGATTGGCCTGTTGAAGAAGCTTTGTCTTTTGCAAAGTTATCGCTCAAATGCGCCGAGTTAAGACGTAAAGACAGGCCGGATCTTGGGAAGGCTATCCTTCCTGAGCTTAACAGGTTGAGAGCTATGGCAGAAGATACAATGCATCCAACACTGATGGGAGACGCAAGCCCTTCTCGCAACAACAGCCAAGTTTCTCTTCAGTTGGGAGCAATGGCTTCATCTCCACAATCATATAATAGCTCGAGAAATCCATCGGTTAATTTTTGA 2358 43.89 MWLPRYSLERKEKLNVNGFVAVAIDKDKGSQGALKWAIDHLLQRGHTVFLIHVKLKSPSNSTQKMKPDPEASVKDLFLPFRCFCTRKDIQCKDVVLEDTDVAKAIIEYAANTTIENIVVGASAKSGFLRFKATDVPGSIVKGAPDFCNVFVISKGKIQSMRSASRPAPTVGALRGQLAQQCSTKSDTPDFPVSHSASARVSLDKPPLDLPNKSQDEADFMRESDEKKCVGSRSPFTRKGYNYKPSYGDLPMQDSDISFVSSGRPSIDRIFPTLYESQDMVGRATPPQISSSTDLDLTRSFESLQLGRMSLDMNFPSEFSSISQDSDRLSISSQSMEDVEAEMRRLKLELKQTMEMYSTACKEALTAKQKAVELQRWKLEEEQRLEEARLAGEAALALAEQEKAKSKAAVEAAEAARRIAELEAQKRMKAEMKALKEAEEKKKAFDALAQTDNIRYRKYTIEEIEAATEFFSESRRIGEGGYGPVYKCDLDHTPVAIKVLRPDATQGRSQFKQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMANGSLEDRLLRRGNTPPLSWQLRFKIAAEIGTALLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSIADSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITSRPPMGLTHHVERAIEKGMFETILDPAITDWPVEEALSFAKLSLKCAELRRKDRPDLGKAILPELNRLRAMAEDTMHPTLMGDASPSRNNSQVSLQLGAMASSPQSYNSSRNPSVNF 785
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2501637 2507092 + MELO3C003606.2.1 Cme04g00320 324581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00320 785 Coils Coil 361 381 - -
Cme04g00320 785 Gene3D Phosphorylase Kinase; domain 1 448 542 - -
Cme04g00320 785 ProSiteProfiles Protein kinase domain profile. 470 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme04g00320 785 MobiDBLite consensus disorder prediction 766 785 - -
Cme04g00320 785 SMART serkin_6 470 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme04g00320 785 CDD STK_N 20 155 - -
Cme04g00320 785 Pfam Universal stress protein family 21 144 IPR006016 -
Cme04g00320 785 MobiDBLite consensus disorder prediction 184 210 - -
Cme04g00320 785 Gene3D HUPs 9 152 IPR014729 -
Cme04g00320 785 Coils Coil 395 447 - -
Cme04g00320 785 SUPERFAMILY Protein kinase-like (PK-like) 453 727 IPR011009 -
Cme04g00320 785 PANTHER OS02G0152300 PROTEIN 12 782 - -
Cme04g00320 785 Coils Coil 328 355 - -
Cme04g00320 785 Pfam Protein kinase domain 471 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme04g00320 785 Gene3D Transferase(Phosphotransferase) domain 1 543 750 - -
Cme04g00320 785 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 12 782 - -
Cme04g00320 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 588 600 IPR008271 GO:0004672|GO:0006468
Cme04g00320 785 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 152 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme03g01706 Cme04g00320 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00320 Cme-Chr4:2501637 Cme06g00175 Cme-Chr6:1068850 1.40E-94 dispersed
Cme01g01299 Cme-Chr1:16365037 Cme04g00320 Cme-Chr4:2501637 0 transposed
Cme01g02830 Cme-Chr1:35244926 Cme04g00320 Cme-Chr4:2501637 0 transposed
Cme03g01407 Cme-Chr3:23519130 Cme04g00320 Cme-Chr4:2501637 0 transposed
Cme05g01224 Cme-Chr5:19805120 Cme04g00320 Cme-Chr4:2501637 0 transposed
Cme05g02054 Cme-Chr5:28851775 Cme04g00320 Cme-Chr4:2501637 2.14E-09 transposed
Cme09g01573 Cme-Chr9:20662260 Cme04g00320 Cme-Chr4:2501637 6.59E-09 transposed
Cme03g01705 Cme-Chr3:25699444 Cme04g00320 Cme-Chr4:2501637 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64786 PF00069 Pkinase 1.50E-39 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00320 - - csv:105435028 1347.8