Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01302 ATGGGTATGAAAATGCAGCAGAGCAACAACTCTGCGGCTATGAAGTGGAATGAGCAAATGGGAACGACAAAGAAGGGTTACACATTTGTTCAAGCTAATAGGGCTTGGCTTAGAAAGTATCTTCTGTTTTGGATTATGGGGATGGCGTTTATCAGCATGTTAATTTATAATGGGATGGATGCCGATAATAAAGTGAGGCGGAACGAAGTTTTGGGAAGCATGTGTGAGCAGAGAGCAAGGATGTTGCAGGATCAATTCAGTGTTAGTGTTAACCATGTTCATGCGTTGGCTGTCCTTGTTTCCACCTTTCATTACTTCAAAAACCCTTCTGCTATTGATCAGGAAACTTTTGCAGAATACACAGCCAGAACTGCTTTTGAACGGCCTCTACTCAGTGGGGTGGCGTATGCACAAAGAGTGATTCATTCAGAGAGGGATACCTTCGAAAAGCAACATGGATGGATGATAAAAACAATGAAAAGGGAACCTTCACCAATTCGAGATGAATATGCACCAGTAATATTTTCTCAAGAAACAGTCTCGTATATTGAATCACTGGATATGATGTCAGGAGAGGAGGACCGTGAAAATATTTTGAGGGCTAGAGCAACAGGAAAGGCTGTTTTGACAAGCCCCTTCAGGCTACTGGGTTCTCATCATCTGGGAGTTGTTTTGACGTTTCCTGTTTACAAATCCAAATTGCCATCTAAACCTACTGAAGAAGATCGGATTGAAGCAACAGCAGGCTACGTTGGTGGAGCCTTTGATGTTGAGTCACTTGTGGAAAACTTGCTTGGGCAGCTTGCAGGGAATCAGGCTATATTGGTAAATGTATATGATGTCACAAACTCTTCTGATCCCCTCATCATGTATGGTCATCAATATCAAGATGGTGACTTGTCTCTTTTGCATGAGAGTAGCCTTGATTTTGGAGATCCATTCAGGAAGCATTTGATGATTTGTAGATATCAGCAGAGGGCTCCCACATCCTGGACTGCTCTGACTACTGCATTCTTATTCTTTGTGATCGGGTTGTTGGTTGGATACATTTTGTATGGTGCAGCAACTCACATTCTGAAGGTTGAAGATGATTTTCATGAGATGCAAATACTGAAAGTTCGGGCAGAGGCTGCTGATATAGCAAAATCTCAGTTTCTTGCAACTGTTTCTCACGAAATTAGGACACCAATGAATGGCATCCTCGGAATGCTCGCACTGCTTCTGGATACAGATTTAAGTTCTACACAGAAGGATTATGCTCAGACTGCTCAGGCTTGTGGAAAGGCACTGATAGCATTAATAAATGAGGTTCTTGACCGGGCAAAAATTGAAGCTGGGAAGTTAGAACTGGAAGCAGTTCCGTTTGACATTCGATCAATACTCGATGATGTGCTATCTTTATTTTCTGAGAAGTCTAGACAAAAGGGTCTGGAGCTGGCAGTTTTTGTTTCTGATAAAGTTCCAGAAATTGTTATTGGAGACCCTGGAAGATTCAGACAAATTATAACAAATCTTGTGGGTAACTCTGTTAAGTTTACTGAAAGGGGACATATATTTGTTAAAGTGCACCTAGCTGAGCACTCAAAAGGCTCCATTGACTCAAAATATGTCAATGGAATATCTGACAGTGACTTATTCATATCTGGTGGTCGTGAGTTTCAAACTTTGAGTGGATGTGAGGCAGCCGATGATCAGAATGCCTGGGATAACTTTAAACATCTAATAGCTGATGAGGACTTCCAGTTGAATGCCACTCCAAACAGCATGGTAGTTGCCAACGATGGTTGTGGTCATGTTACTTTGATGGTAAGTGTGGAGGATACTGGAATTGGGATTCTCTTACATGCTCAAAATCGAGTTTTCATGCCCTTCATGCAAGCAGATAGCTCGACCTCCCGAAATTATGGGGGGACTGGTATCGGCTTAAGTATCAGTAAATGTTTAGTTGAACTAATGGGTGGTCAGATAAACTTCATAAGCCGGCCTCAGATAGGAAGCACGTTTTCCTTCACTGCTGTTTTTGGAAAATGTAAGAAAAACTCAATCAATGATATGAAAAAACCAAACTCTGAAGAACTTCCCCCCAGTTTTAGAGGAATGAAAGCCATCATAGTTGACAGGAAACATGTTAGAGCTTCTGTAACCAGGTATCATTTGAAGAGACTTGGTATTAAAGTTGAAGTCACCTGTAGCATCAACATGGCAGCTTCTTTATGCAGAGAAAATGGATCCACAATACCAGGAAATGCAATCCTTCCAGATATGATCTTAGTTGAAAAGGATACGTTAAATTCCGACGAGGAATGTGGGATCATTCGTCAATTGAACTTGAAACTGAATGGGAATTCGTTTAAGTTACCGAAGTTGATCCTTCTTGCTACAAATATTACCACTGCAGAGCTAGACAAGGCAAAAGCAGTAGGTTTTTCCGACACCGTGATCATGAAACCGTTGAGGGCCAGTATGGTGGCAGCCTGTCTGCAACAAGTACTCGGGGTTAAGAATCAGAGACGGGGAAGAGGCCTACCCATCGGTTCTGCTTTCCTTCAGAGCCTTCTCTGTGGCAAGAGAATTTTAATTGTTGATGACAATAGAGTAAACCGTAGGGTTGCTGCAGGTGCTCTGAAGAAATTCGGTGCAGATGTTGAGTGTGCAGATAGCGGGAAAGCTGCCCTGAAGTTGCTTCAGCTACCTCACAATTTTGATGCTTGCTTCATGGATATTCAAATGCCTGAAATGGATGGGTTTGAGGCGACTCGTCTGATCAGGATGATGGAGAACAAGGAAAATGAAGGAGGAACTTATGCAGGAGAAGGCAAGTGGCATATGCCGATATTAGCCATGACTGCAGATGTGATTCATGCTACGTATGACGAATGCCTGAAATGTGGAATGGATGGCTACGTCTCGAAACCCTTTGAGGAAGAAAATTTATACAAAGAAGTTGCCAGGTTTTTCAAAAAATCATAG 2970 42.15 MGMKMQQSNNSAAMKWNEQMGTTKKGYTFVQANRAWLRKYLLFWIMGMAFISMLIYNGMDADNKVRRNEVLGSMCEQRARMLQDQFSVSVNHVHALAVLVSTFHYFKNPSAIDQETFAEYTARTAFERPLLSGVAYAQRVIHSERDTFEKQHGWMIKTMKREPSPIRDEYAPVIFSQETVSYIESLDMMSGEEDRENILRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLPSKPTEEDRIEATAGYVGGAFDVESLVENLLGQLAGNQAILVNVYDVTNSSDPLIMYGHQYQDGDLSLLHESSLDFGDPFRKHLMICRYQQRAPTSWTALTTAFLFFVIGLLVGYILYGAATHILKVEDDFHEMQILKVRAEAADIAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQKDYAQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDIRSILDDVLSLFSEKSRQKGLELAVFVSDKVPEIVIGDPGRFRQIITNLVGNSVKFTERGHIFVKVHLAEHSKGSIDSKYVNGISDSDLFISGGREFQTLSGCEAADDQNAWDNFKHLIADEDFQLNATPNSMVVANDGCGHVTLMVSVEDTGIGILLHAQNRVFMPFMQADSSTSRNYGGTGIGLSISKCLVELMGGQINFISRPQIGSTFSFTAVFGKCKKNSINDMKKPNSEELPPSFRGMKAIIVDRKHVRASVTRYHLKRLGIKVEVTCSINMAASLCRENGSTIPGNAILPDMILVEKDTLNSDEECGIIRQLNLKLNGNSFKLPKLILLATNITTAELDKAKAVGFSDTVIMKPLRASMVAACLQQVLGVKNQRRGRGLPIGSAFLQSLLCGKRILIVDDNRVNRRVAAGALKKFGADVECADSGKAALKLLQLPHNFDACFMDIQMPEMDGFEATRLIRMMENKENEGGTYAGEGKWHMPILAMTADVIHATYDECLKCGMDGYVSKPFEEENLYKEVARFFKKS 989
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 18034455 18042520 + MELO3C005250.2.1 Cme09g01302 338162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01302 989 Coils Coil 431 451 - -
Cme09g01302 989 SUPERFAMILY CheY-like 696 833 IPR011006 -
Cme09g01302 989 PANTHER TWO-COMPONENT HISTIDINE KINASE 22 988 - -
Cme09g01302 989 PANTHER HISTIDINE KINASE 4 22 988 - -
Cme09g01302 989 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 368 447 IPR036097 GO:0000155|GO:0007165
Cme09g01302 989 Gene3D - 354 444 - -
Cme09g01302 989 SUPERFAMILY CheY-like 855 986 IPR011006 -
Cme09g01302 989 ProSiteProfiles Response regulatory domain profile. 857 986 IPR001789 GO:0000160
Cme09g01302 989 CDD HisKA 381 442 IPR003661 GO:0000155|GO:0007165
Cme09g01302 989 Pfam His Kinase A (phospho-acceptor) domain 381 446 IPR003661 GO:0000155|GO:0007165
Cme09g01302 989 Gene3D - 59 111 - -
Cme09g01302 989 ProSiteProfiles Response regulatory domain profile. 701 831 IPR001789 GO:0000160
Cme09g01302 989 PRINTS Bacterial sensor protein C-terminal signature 601 615 IPR004358 GO:0016310|GO:0016772
Cme09g01302 989 PRINTS Bacterial sensor protein C-terminal signature 619 629 IPR004358 GO:0016310|GO:0016772
Cme09g01302 989 PRINTS Bacterial sensor protein C-terminal signature 636 654 IPR004358 GO:0016310|GO:0016772
Cme09g01302 989 PRINTS Bacterial sensor protein C-terminal signature 660 673 IPR004358 GO:0016310|GO:0016772
Cme09g01302 989 SMART HKATPase_4 493 676 IPR003594 -
Cme09g01302 989 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 493 673 IPR003594 -
Cme09g01302 989 ProSiteProfiles Histidine kinase domain profile. 388 676 IPR005467 -
Cme09g01302 989 CDD REC_hyHK_CKI1_RcsC-like 858 982 - -
Cme09g01302 989 SMART REC_2 856 982 IPR001789 GO:0000160
Cme09g01302 989 Gene3D - 851 989 - -
Cme09g01302 989 Gene3D - 695 837 - -
Cme09g01302 989 Gene3D CHASE domain 112 327 IPR042240 -
Cme09g01302 989 CDD HATPase_EvgS-ArcB-TorS-like 498 674 - -
Cme09g01302 989 Pfam Response regulator receiver domain 858 982 IPR001789 GO:0000160
Cme09g01302 989 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 435 671 IPR036890 -
Cme09g01302 989 SMART HisKA_10 381 446 IPR003661 GO:0000155|GO:0007165
Cme09g01302 989 Pfam CHASE domain 111 291 IPR006189 -
Cme09g01302 989 ProSiteProfiles CHASE domain profile. 108 320 IPR006189 -
Cme09g01302 989 Gene3D - 445 678 IPR036890 -
Cme09g01302 989 SMART CHASE_2 108 293 IPR006189 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme09g01302 Cme10g00626 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme09g01302 Cme-Chr9:18034455 Cme10g01141 Cme-Chr10:10840410 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
41957 PF02518 HATPase_c 2.90E-31 CL0025 Cme TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01302 K14489 - csv:101209777 1907.88