Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01573 ATGGTGATTTATGGTTCCTTTGCTGCACCACACTACAAGAGGAGGGAGCACAGCATGTCTAATGAAATATTAGGACGGCGAACTTGGGCATCTCTAACGGGAAATTCTGCCTGTGGAGGGAGGTTTGATGCTAAGAGTTGCATAATTATGGAGGTGACGGCAGATCAAGCCAAGAAAAATCATATGTTGCTGCCTTCCTCTTCTCCAGTTGTAGCCGTTGCTATCAGTGGGAAGAAAAACATGGGAAACGCAATTCCAGTTTCACAAGTTCGTGAGGACGTCGCTGTGGCTTATAGGAAAGAAATCTGGTGGCAGACAAGCGAAAAACTTCTTCCATTTAAGAAGATGTTTGCTCAGCGAAAGGTTCATGTTGATGTTGTAACTCTTGAAGCAGATGATGTAGTCGATGCAATAATAGAAGAGGTTACAAAGTGTTCAATCAACAAGCTTGTTATAGGAGTTTCATCACAGGGATTATTCTCAAGGAAACTAAGCGGTCTATCCTCAAGAATATCAGCCCTTGCACCTAGATATTGTACAGTGTATGCTATTTCAAAAGGAAAACTAGCCTCAATACGACCACCTGATATGGATACGGACGTGAGCATTAGAGATGATGCGAGTGAAGAAAGTTCTGCAAGTAGCTACTCGAGCTATACATCTAGCTCCCTTACAGATGGCAGTTCGAGCTTAACTACCTCCTACTCTCATTTCCCTTCTCCTTCCCCTTCCCTACCATTACAACGATTTCAAGCTCTTTCAACCATTAATCAACCTCTTCTTACAAAAAAACCTAGCCTCATTAAAGCCGACCATTCTAGATGTCAATCCATTGACATTGAGGTGGTGGATGGTGTTCGCTCTTCTTCCCATGTTTCAGACTGCACACAAACATTGAGTCGAGCCTCTAGTAGTAAAAGCTCGCCAACAGAGAACCAGTCTTGGATTTCTGATGAAGCTTCATCTTCAGGCGCTTTTAATGATTATTCCTCATGTGAAAGTCAGGAGGACCCGGTTTCATGTGTGCTAGACATCAAGCCATTCATCAATAGTTCGAATCCACAAGCGGACGTCAGCTTTGAGCTTGAAAAGTTGAGAATCGAACTAAGACATGCGAGAGGAATGTATGCAATTGCCCAACGAGAGACGATTGATGCCTCTCGAGAGGACCATTTTGACAATCTCTCCTATGCCAGTCTAGGCAACATACCAAGTGCCTTTCTCTTTTGTGGGCTTCTAGGGAAGCTGAACCATCTAAATAAGCAACGATCTGAGGAAGCTAGGAAGCTCGAAGAGATCAACAACAAAGTGGTGGCCGCCAAAGAATTTGCAAGGGAAGAGAGAGTGAAACATGAAGCTTTGAGAAGAGAAGCAAAGTATGTAAAAGAACGCGCCGAAAGAGAGGGCATCTATAGGAAGGAAGCAGAGACAAAAGCTCTTCAAGATGCCAAAGAGAAGGGAAAGCATGAGAATGCTCTTCAAGGACCTCTGCAGCAATATCAACATTTTCAGTGGGAAGATATTGTTTCTGCCACATTATCTTTCTCTGAGGATCTTAAGATTGGAATGGGAGCACATGGAACAGTTTATAAGTGCAGTTTGCATCATACAACTGTAGCAGTGAAGGTTCTTCATTCTAGAGATAGTCACAAACAGATGCAATTGCTTCAGGAGCTAGAAGTCTTGAGCAGAATCCATCATCCCCATCTACTACTACTCCTTGGTGCTTGTCCGGATAAGAATTGTCTAGTTTATGAGTACATGGAAAATGGTAGCTTGGAGGATAGGTTGTACCGCAGAGGCAATACACCTGCAATCCCATGGTATGAGAGGTTTCGAATTGCTTGGGAAATAGCCTCTGCTCTTGTCTTTCTTCACAGCTCAAAACCAAAATCAATAATCCACCGTGATCTTAAACCAGCAAACATCTTACTTGACCAAAACCTTGTGAGTAAAATTGGCGATGTCGGTCTTTCTACAGTGTTTAATTCAGATCCTTCAATGTCTACTGCATTCATGAATAGTGGACCAGTTGGGACTCTCTGTTACATAGATCCTGAGTATCAACGAACTGGATTAATCTCACCGAAGTCTGATGTCTATGCTTTTGGAATGGTGATCTTGCAGTTACTTACTGCAAAACCAGCAGTAGCACTAACCCATGTGGTGGAAACAGCCATTGATAACAGCAATTTAATTAAGGTTCTGGATATAGAGGCTGGGCATTGGCCCCTCGAAGAGACGTATGAATTGGCAAGATTAGGACTTCGCTGTGCCGAGATGCAACGTAAAGATAGGCCTGACTTGAAGGACCAAGTACTTCCCTTGTTGATGACACTGAAAAAAGTTGCTGATGAGGCTCGAAATTTTGCCTCCAAAGTTCCAGCTGCAATTCCTAACCATTTCATCTGTCCAATACTTCAGTTGGTGAACATGTCTCTAGAAAGTTTCTAA 2454 42.99 MVIYGSFAAPHYKRREHSMSNEILGRRTWASLTGNSACGGRFDAKSCIIMEVTADQAKKNHMLLPSSSPVVAVAISGKKNMGNAIPVSQVREDVAVAYRKEIWWQTSEKLLPFKKMFAQRKVHVDVVTLEADDVVDAIIEEVTKCSINKLVIGVSSQGLFSRKLSGLSSRISALAPRYCTVYAISKGKLASIRPPDMDTDVSIRDDASEESSASSYSSYTSSSLTDGSSSLTTSYSHFPSPSPSLPLQRFQALSTINQPLLTKKPSLIKADHSRCQSIDIEVVDGVRSSSHVSDCTQTLSRASSSKSSPTENQSWISDEASSSGAFNDYSSCESQEDPVSCVLDIKPFINSSNPQADVSFELEKLRIELRHARGMYAIAQRETIDASREDHFDNLSYASLGNIPSAFLFCGLLGKLNHLNKQRSEEARKLEEINNKVVAAKEFAREERVKHEALRREAKYVKERAEREGIYRKEAETKALQDAKEKGKHENALQGPLQQYQHFQWEDIVSATLSFSEDLKIGMGAHGTVYKCSLHHTTVAVKVLHSRDSHKQMQLLQELEVLSRIHHPHLLLLLGACPDKNCLVYEYMENGSLEDRLYRRGNTPAIPWYERFRIAWEIASALVFLHSSKPKSIIHRDLKPANILLDQNLVSKIGDVGLSTVFNSDPSMSTAFMNSGPVGTLCYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPAVALTHVVETAIDNSNLIKVLDIEAGHWPLEETYELARLGLRCAEMQRKDRPDLKDQVLPLLMTLKKVADEARNFASKVPAAIPNHFICPILQLVNMSLESF 817
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 20662260 20668426 + MELO3C005490.2.1 Cme09g01573 338433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01573 817 MobiDBLite consensus disorder prediction 195 222 - -
Cme09g01573 817 Pfam Protein kinase domain 517 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme09g01573 817 MobiDBLite consensus disorder prediction 208 222 - -
Cme09g01573 817 ProSitePatterns Protein kinases ATP-binding region signature. 521 542 IPR017441 GO:0005524
Cme09g01573 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Cme09g01573 817 SUPERFAMILY Protein kinase-like (PK-like) 497 771 IPR011009 -
Cme09g01573 817 Coils Coil 362 382 - -
Cme09g01573 817 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 79 810 - -
Cme09g01573 817 PANTHER OS02G0152300 PROTEIN 79 810 - -
Cme09g01573 817 MobiDBLite consensus disorder prediction 294 317 - -
Cme09g01573 817 ProSiteProfiles Protein kinase domain profile. 515 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme09g01573 817 SMART serkin_6 515 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme09g01573 817 CDD STK_N 70 187 - -
Cme09g01573 817 Coils Coil 416 447 - -
Cme09g01573 817 Gene3D Transferase(Phosphotransferase) domain 1 588 795 - -
Cme09g01573 817 Gene3D Phosphorylase Kinase; domain 1 484 587 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme06g01014 Cme09g01573 CCT
Cme06g01014 Cme09g01573 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme09g01573 Cme-Chr9:20662260 Cme06g00175 Cme-Chr6:1068850 2.39E-88 dispersed
Cme09g01573 Cme-Chr9:20662260 Cme04g00320 Cme-Chr4:2501637 6.59E-09 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65169 PF00069 Pkinase 6.90E-41 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01573 - - csv:101217665 1224.92