Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g01183 ATGGAGAAGACGACGGTGAAGCTGTCGGTGTTGGCAAAATCTCAACGGATTCCTACATTCGCTTCTTCCCTCAATCCGAAGTCGGGGAACCAATCGCCGGAATTGGATCTTCGGCAGACGTTAAGTTCACGGAGGGATTCTCGGCGGAGGATCCGAAATCTTTCGTTGATTAAGAGGAAATTGGCGCCGTCCGGGCCGAGGAGTCGGCCGCAGACTCCGCTTCTGAAGTGGAAGGTCGAGGTGAGAGTCGATGGTGAAGGTGAGGGAGACGAGGACGAGAAGAAGTCGGAATCGGAGAACGGAGGGAAAGATCTCCGGCGGATGAGTCGGGAAAGAGACGTGAATGTATCGGCAAGGAAGCTCGCTGCTGGTTTTTGGCGGTTTCAGAAGCCGGAGGTGAGCGCTGATGGAGGAAGGAGAGGTTTGAGACGAACGCTGGAGCAGGGGATCGGTTTTCAGCCAGTTGCTGGCCATGTTCGAGTTCCAATTCTCCGCCATCATAACAACAACATATTAAGTAATGAAACAAGGGATCTGTTACAGAGCCAACCATCAACTTCTGGTATGAGAAATGGCGTTCTGTGCAAGGTAATGTCGCATCACTTTCATGTTCCTCTCTTTCAATTTCTTATTGATTGCTATAAATTTGAAGTGTTTTCTTCTGCCATTCCTGCCATTAGCTTGAGCCTTATGGAGGGGGCAACTAAATGGGACCCTATCGGCTCGAAAATTTCAGATGAAAGGGGCCATATTTACAATCAAACCGAGCTTCTTGACCAACAAATGAGCCTGGTTTCGGTTATATGTGCACTTCAAGCTGAACTAAAGCAGGCACAGGTACACATTTTGGAACTCGAAACTGAACGCCATGTATCGAAAAAGAAGCTCGAGAGCTTCTTGAGAAAGGTTGATAAGGAGAAGACTGCATGGCGTATGAGGGAGCATGATAAAATCCGTGTATTCATGGAAAGTATCAGAACTGAGTTGAACTATGAAAGAAAAAACCGAAGAGGAGCAGAACATTTCAATTCAAAGCTGGTTCATGAGCTAGCTGATGCCAAGTCTTTGGTGAAGCAGTTGATGCGGGACTATGAAGAAGAAAGAAAGGAAAGGGTGTTGATTGAACAAGTGTGTGAAGAGCTTGCTAAAGAGATTGGAGACGACAAGGCGGAAATCGAGGCGTCAAAGAGAGAATCTGCGAAACTTAGAGAGGAAGCAGAAGAAGAGAGAAAGATGTTGCAGTTGGCAGAAGTATGGCGTGAAGAGCGCGTTCAAATGAAGCTGGTCGACGCCAAGGTGGCTGTAGAAGAGAAGTACTCTCAAATGAATAGGCTTGTTTCAGATCTTGAAAACTTCCTAAGATCAAGGGGAGCAATCTCAGATATTAAGGAGATGAGAGAAGCTATATTACTAGGACAGGCTGCTTCTGCAGTGAACATTCAAGACATAAAGCAGTTATCTTACCAACCTTCTAAGCCAGATGATATTTTCTCCATCCTTGAAGGAGTTAACTTTGATGAAAACCAAGAAAAGGAGGTTAACCCATATGGTTCTTACAGTCCAGCTACCGAGATCCCGAAAGCTGGAACAACGAGCCCCGACTTAACTGTGGATGCAGCTAAACGGGTGGATGGCACCCTGATGGCCTCACATGCGTGTATTGATCAGAATGGCGACATAGACGACGAGAGTGGATGGGAAACGGTGAGCCAAGTTGAGGATCAGGACTCGAGTTATTCACTGGAAGGATGCACAATACCACCTGCTGCTAATAAGAATTGCAAAAAGAGTAGCATCTCAGGCTCAGGGAGTGGAACAGACTGGGAAACAACAATCAACATCAGTGAAGTCTATTCAGAACTTGTAAAGAAATCAAAGAAAGTATCAAACTTAACAAAGAGGCTATGGAAATCCGGCCATAATAACGGTCGGGGGGACATCAAGACGATACCAGTAAAGGAGTCGAATGGGATAGCATCATCACCAGAAGCAGAATCAGGCAATGGCGGGTCTAGTCCAGATTTTATTGGTCGGTGGAGTTCCTTCGACTTAAGTGACGCTCGAATAGCTCGACAGAGGAAAGTCCAGATTAATGTGAAAGAAAGTCAGAAACTGCAGCTAAGGCATGCCCTTAAACAGAAGATATAG 2148 46.18 MEKTTVKLSVLAKSQRIPTFASSLNPKSGNQSPELDLRQTLSSRRDSRRRIRNLSLIKRKLAPSGPRSRPQTPLLKWKVEVRVDGEGEGDEDEKKSESENGGKDLRRMSRERDVNVSARKLAAGFWRFQKPEVSADGGRRGLRRTLEQGIGFQPVAGHVRVPILRHHNNNILSNETRDLLQSQPSTSGMRNGVLCKVMSHHFHVPLFQFLIDCYKFEVFSSAIPAISLSLMEGATKWDPIGSKISDERGHIYNQTELLDQQMSLVSVICALQAELKQAQVHILELETERHVSKKKLESFLRKVDKEKTAWRMREHDKIRVFMESIRTELNYERKNRRGAEHFNSKLVHELADAKSLVKQLMRDYEEERKERVLIEQVCEELAKEIGDDKAEIEASKRESAKLREEAEEERKMLQLAEVWREERVQMKLVDAKVAVEEKYSQMNRLVSDLENFLRSRGAISDIKEMREAILLGQAASAVNIQDIKQLSYQPSKPDDIFSILEGVNFDENQEKEVNPYGSYSPATEIPKAGTTSPDLTVDAAKRVDGTLMASHACIDQNGDIDDESGWETVSQVEDQDSSYSLEGCTIPPAANKNCKKSSISGSGSGTDWETTINISEVYSELVKKSKKVSNLTKRLWKSGHNNGRGDIKTIPVKESNGIASSPEAESGNGGSSPDFIGRWSSFDLSDARIARQRKVQINVKESQKLQLRHALKQKI 715
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9618144 9620687 - CmoCh01G011830.1 Cmo01g01183 374666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g01183 715 MobiDBLite consensus disorder prediction 654 668 - -
Cmo01g01183 715 MobiDBLite consensus disorder prediction 513 533 - -
Cmo01g01183 715 PANTHER GB|AAF24581.1 36 715 IPR043424 -
Cmo01g01183 715 PANTHER ACTIN CYTOSKELETON-REGULATORY COMPLEX PAN-LIKE PROTEIN 36 715 - -
Cmo01g01183 715 MobiDBLite consensus disorder prediction 20 47 - -
Cmo01g01183 715 Coils Coil 343 416 - -
Cmo01g01183 715 MobiDBLite consensus disorder prediction 20 38 - -
Cmo01g01183 715 MobiDBLite consensus disorder prediction 85 111 - -
Cmo01g01183 715 MobiDBLite consensus disorder prediction 639 674 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01183 Cmo16g00894 CCT
Cmo01g01183 Cmo06g00920 CCT
Cmo01g01183 Cmo06g00920 ECH
Cmo01g01183 Cmo16g00894 ECH
Cmo01g01183 Cmo09g00951 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01183 Cmo-Chr1:9618144 Cmo04g01033 Cmo-Chr4:5169346 6.62E-179 dispersed
Cmo15g01381 Cmo-Chr15:9405419 Cmo01g01183 Cmo-Chr1:9618144 1.49E-15 dispersed
Cmo01g01183 Cmo-Chr1:9618144 Cmo16g00894 Cmo-Chr16:5138988 9.54E-176 wgd
Cmo01g01183 Cmo-Chr1:9618144 Cmo09g00951 Cmo-Chr9:4999968 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g01183 - - csv:101222707 972.615