Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00381 ATGGCTACTTACTATTCTAGTTCGAGTAATGGAAGGGAGGCTACTCCTATCCTCTACTCGAGAGGAGCTTTGATCGGTTCATATGAAGACTCGTCGATTCTTCCCCGGAATATGATGATGCATAATTCTGGGATGTACATGGATTCATGTCCTTCACCGGGAGACAATGGTTGTGGTCAGATAACGTCGGTTGGAGCAGCGGGAACGAGCCAACAACAGCAGGAGTTTTTGTCGAACCTCGGTGGTTCGGAGATTGCTGAGCATGATTTCGATACATGGAGAGGAGAGGGAAGGAGTGAAATGGTTGGTGCGAGCTCGATGCGTGGCCCGACCAATGTTCTTCATGGTGGGCAGAATTTGCAGGGTCAGGGGTTATCCCTTACTCTTAGTACACAAATTCCATCTGGAATTCAAATGCCTTCAATTCCTTATAGGAATTCGGATATGGGTTTAGCTTCGTTCTTGAGTCCGAATCCGACCAGTTCAGGCGACGATGGCTGCAGAAATGGCAGTTCTAGAGACGAGCAGTTGGCAAAGGGGGAATTATCTCAATACAGTATGTCTACGATTGCGAGAACGATGCCGAACTCGAAGTACCTTAAGGCAGCACAACAACTCCTTGATGAAGCTGTTAATGTCAGGAAAGCTTTGAAGCGACCTAATAATGAGAGAAACCAGAGCTCACATGAGCATGAAACTAGAAGTGGAAAGAATGGTGATGCAGGAACCAAAAACGACGGTTCGATGCTCACTGCAAGCGGAGCGTCTTCGAACCCTCAAGAAACTGGAAGCAATTCAACTTGTGAGCTCTCTCATGCTGAAAAGCAAGATTTGCAGAACAAGTTGACAAAGCTTTTATACATGTTGGATGAGGTAATATACTCTCTTATATTCTCTAGATTAGATGAACACATTCGATTCGGTTTTCGGTTGAAATGGTTTGTGGCACCGACTTATTCCGAAGTACGAGCTCAAGGTGAACTGGTTGATAGAAGGTACAATCAGTATTACCATCAAATGCAGATTGTGGTATCATCATTTGATGTTATAGCAGGATGTGGGGCGTCTAAGCCATATACTGCACTTGCACTCCAGACTATATCTCGTCATTTTCGGTGCTTGCGGGATGCAATAGCTGGTCAAGTTCGAGCTACCCGTAAAAGCCTGGGAGAGCATGAGAATTCTGGAAATGACAAAGGAGTTGGAATCACCCGTCTCCGGTACGTCGACCAGCAGTTAAGGCAACAAAGGGCTCTTCAGCAGCTTGGTATGATACAGCAGCATGCATGGAGGCCTCAAAGAGGGTTGCCTGAGAACTCTGTTTCGATTCTTCGTGCTTGGCTGTTCGAGCATTTCCTTCATCCGTATCCAAAGGACTCTGATAAGATCATGTTGGCAAGGCAAACAGGATTGACTAGAAGTCAGACCAAACCTTGTATGTCTGAAAAGATGTGTCTGCTGGAAGTAGGTACATGTCGTGGAGGCTGCCGATTTAGCTCCATTTTATTTCTCCACCATGTCTATATTTACCTCGAGTTTTGTTGTACTGACATGTGTATCGATATTAAATTTGATGTTGTCGATGGGCTTGTGCAGGTCTCTAATTGGTTTATCAATGCACGCGTGCGTCTTTGGAAACCTATGGTAGAGGAAATGTACAAGGAAGAGGCAGGCAGTGCAGAAATGGACTCTATATCTTCATCTGAAAATGTTGGCAAGGGAACAAAAGGAGATAACAGGACCTTTGAGGATAATAAGGAGGAGGATCTGCAACAAAGTACAAGTTCAACAGCCACCGAAAGATGTAGCGCTGGAGACATTATCGACTTAAAATCCGATCAGGCCTCTAATCTTGGAAATTCAGGTTCCACCAGACTAGCTAGTTTCCAAAATGGTGCTCACATCGAAGCTCAAAACGAGCTGGTAAAGTCGAGGGAGGAGCTAAGGCCTAATGTAAATAACTCTAATTTCTTTCCTGATGCAATTGTCCAGTCTCAGGCAGGAAGTGACAGGTTTATGGCTGCCGCTGCTGCCTATCACATGTCTGAACTGGGAAGGTTCGGGGCGGTTAGTGGGGTATCGCTTACACTGGGCTTACAGCATTGTGAGGGTGGTGGCATACCTATGCCCACTGGGACACATCATGGTTTTGCAGCCATGAGAGGAGACGAAATGTACAATGCTGCAGCGTCTTCTCTCGGGGACACAGGCCATTTTGAATGCGTAAACGCTGGTAATCCGCAACCGAGGTTCGGCCCTTCTCATCTTTACCATGATTTTGTTGTTGTATCAGTGGTTTCTGAAATCAAGAAAGTAACAATTAGTCACTTTGAGCATACCTCAATCGATAAAAACACG 2358 45.59 MATYYSSSSNGREATPILYSRGALIGSYEDSSILPRNMMMHNSGMYMDSCPSPGDNGCGQITSVGAAGTSQQQQEFLSNLGGSEIAEHDFDTWRGEGRSEMVGASSMRGPTNVLHGGQNLQGQGLSLTLSTQIPSGIQMPSIPYRNSDMGLASFLSPNPTSSGDDGCRNGSSRDEQLAKGELSQYSMSTIARTMPNSKYLKAAQQLLDEAVNVRKALKRPNNERNQSSHEHETRSGKNGDAGTKNDGSMLTASGASSNPQETGSNSTCELSHAEKQDLQNKLTKLLYMLDEVIYSLIFSRLDEHIRFGFRLKWFVAPTYSEVRAQGELVDRRYNQYYHQMQIVVSSFDVIAGCGASKPYTALALQTISRHFRCLRDAIAGQVRATRKSLGEHENSGNDKGVGITRLRYVDQQLRQQRALQQLGMIQQHAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQTKPCMSEKMCLLEVGTCRGGCRFSSILFLHHVYIYLEFCCTDMCIDIKFDVVDGLVQVSNWFINARVRLWKPMVEEMYKEEAGSAEMDSISSSENVGKGTKGDNRTFEDNKEEDLQQSTSSTATERCSAGDIIDLKSDQASNLGNSGSTRLASFQNGAHIEAQNELVKSREELRPNVNNSNFFPDAIVQSQAGSDRFMAAAAAYHMSELGRFGAVSGVSLTLGLQHCEGGGIPMPTGTHHGFAAMRGDEMYNAAASSLGDTGHFECVNAGNPQPRFGPSHLYHDFVVVSVVSEIKKVTISHFEHTSIDKNT 786
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1948698 1951670 + CmoCh02G003810.1 Cmo02g00381 375978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00381 786 MobiDBLite consensus disorder prediction 576 590 - -
Cmo02g00381 786 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 532 713 - -
Cmo02g00381 786 MobiDBLite consensus disorder prediction 557 601 - -
Cmo02g00381 786 Pfam Associated with HOX 195 379 IPR006563 -
Cmo02g00381 786 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 76 292 - -
Cmo02g00381 786 MobiDBLite consensus disorder prediction 218 271 - -
Cmo02g00381 786 MobiDBLite consensus disorder prediction 218 239 - -
Cmo02g00381 786 MobiDBLite consensus disorder prediction 561 575 - -
Cmo02g00381 786 MobiDBLite consensus disorder prediction 151 167 - -
Cmo02g00381 786 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 329 475 - -
Cmo02g00381 786 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 329 475 - -
Cmo02g00381 786 Gene3D - 425 561 - -
Cmo02g00381 786 CDD homeodomain 430 477 IPR001356 GO:0003677
Cmo02g00381 786 MobiDBLite consensus disorder prediction 240 271 - -
Cmo02g00381 786 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 76 292 - -
Cmo02g00381 786 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 532 713 - -
Cmo02g00381 786 SMART prehox3 188 380 IPR006563 -
Cmo02g00381 786 SMART HOX_1 430 551 IPR001356 GO:0003677
Cmo02g00381 786 SUPERFAMILY Homeodomain-like 431 477 IPR009057 -
Cmo02g00381 786 MobiDBLite consensus disorder prediction 139 181 - -
Cmo02g00381 786 Pfam Homeobox KN domain 447 543 IPR008422 GO:0003677|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00381 Cmo20g00834 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00536 Cmo-Chr1:2636510 Cmo02g00381 Cmo-Chr2:1948698 1.13E-64 dispersed
Cmo02g00381 Cmo-Chr2:1948698 Cmo06g00525 Cmo-Chr6:2534813 1.84E-83 dispersed
Cmo02g00381 Cmo-Chr2:1948698 Cmo20g00834 Cmo-Chr20:4158381 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00381 - - csv:101205137 753.051